RNA–Protein interactions for RNA: ENST00000520679.1

EXTL3-207, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-207ENST00000520679 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
EXTL3-207ENST00000520679 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
EXTL3-207ENST00000520679 AOX1Q06278 1338 aa17.5■□□□□ 0.39
EXTL3-207ENST00000520679 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
EXTL3-207ENST00000520679 GCKRQ14397 625 aa17.5■□□□□ 0.39
EXTL3-207ENST00000520679 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
EXTL3-207ENST00000520679 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
EXTL3-207ENST00000520679 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
EXTL3-207ENST00000520679 TJP1Q07157 1748 aa17.48■□□□□ 0.39
EXTL3-207ENST00000520679 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
EXTL3-207ENST00000520679 MYD88Q99836 296 aa17.48■□□□□ 0.39
EXTL3-207ENST00000520679 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
EXTL3-207ENST00000520679 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 MSH5O43196 834 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 PTCD1O75127 700 aaKnown RBP17.47■□□□□ 0.39
EXTL3-207ENST00000520679 SEC24BO95487 1268 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 STARD3NLO95772 234 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
EXTL3-207ENST00000520679 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
EXTL3-207ENST00000520679 RREB1Q92766 1687 aa17.46■□□□□ 0.39
EXTL3-207ENST00000520679 CDC45O75419 566 aa17.46■□□□□ 0.39
EXTL3-207ENST00000520679 GSPT1P15170 499 aaKnown RBP17.46■□□□□ 0.39
EXTL3-207ENST00000520679 ERC1Q8IUD2 1116 aa17.46■□□□□ 0.39
EXTL3-207ENST00000520679 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
EXTL3-207ENST00000520679 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
EXTL3-207ENST00000520679 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
EXTL3-207ENST00000520679 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
EXTL3-207ENST00000520679 A1BGP04217 495 aa17.45■□□□□ 0.38
EXTL3-207ENST00000520679 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
EXTL3-207ENST00000520679 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
EXTL3-207ENST00000520679 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
EXTL3-207ENST00000520679 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
EXTL3-207ENST00000520679 PDE1AP54750 535 aa17.44■□□□□ 0.38
EXTL3-207ENST00000520679 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
EXTL3-207ENST00000520679 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
EXTL3-207ENST00000520679 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
EXTL3-207ENST00000520679 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
EXTL3-207ENST00000520679 CASP7P55210 303 aa17.43■□□□□ 0.38
EXTL3-207ENST00000520679 TRIM28Q13263 835 aaKnown RBP17.43■□□□□ 0.38
EXTL3-207ENST00000520679 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
EXTL3-207ENST00000520679 OTUD7AQ8TE49 926 aaPredicted RBP17.43■□□□□ 0.38
EXTL3-207ENST00000520679 USP42Q9H9J4 1324 aaKnown RBP17.43■□□□□ 0.38
EXTL3-207ENST00000520679 H7C1W4 665 aa17.42■□□□□ 0.38
EXTL3-207ENST00000520679 CYP19A1P11511 503 aaPredicted RBP17.42■□□□□ 0.38
EXTL3-207ENST00000520679 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
EXTL3-207ENST00000520679 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
EXTL3-207ENST00000520679 TTLL7Q6ZT98 887 aa17.42■□□□□ 0.38
EXTL3-207ENST00000520679 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
EXTL3-207ENST00000520679 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
EXTL3-207ENST00000520679 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
EXTL3-207ENST00000520679 MX1P20591 662 aa17.41■□□□□ 0.38
EXTL3-207ENST00000520679 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
EXTL3-207ENST00000520679 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
EXTL3-207ENST00000520679 SLC4A9Q96Q91 983 aa17.41■□□□□ 0.38
EXTL3-207ENST00000520679 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
EXTL3-207ENST00000520679 CWC25Q9NXE8 425 aaPredicted RBP17.41■□□□□ 0.38
EXTL3-207ENST00000520679 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
EXTL3-207ENST00000520679 APBB1O00213 710 aa17.4■□□□□ 0.38
EXTL3-207ENST00000520679 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
EXTL3-207ENST00000520679 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
EXTL3-207ENST00000520679 RGS17Q9UGC6 210 aaPredicted RBP17.4■□□□□ 0.38
EXTL3-207ENST00000520679 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
EXTL3-207ENST00000520679 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
EXTL3-207ENST00000520679 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
EXTL3-207ENST00000520679 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
EXTL3-207ENST00000520679 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
EXTL3-207ENST00000520679 COPRSQ9NQ92 184 aa17.39■□□□□ 0.37
EXTL3-207ENST00000520679 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
EXTL3-207ENST00000520679 A0A087WZG4 1122 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 SDSP20132 328 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
EXTL3-207ENST00000520679 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 USP21Q9UK80 565 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 TTC41PQ6P2S7 1318 aa17.38■□□□□ 0.37
EXTL3-207ENST00000520679 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
EXTL3-207ENST00000520679 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
EXTL3-207ENST00000520679 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
EXTL3-207ENST00000520679 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
EXTL3-207ENST00000520679 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 ATP5J2-PTCD1G3V325 749 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
EXTL3-207ENST00000520679 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
EXTL3-207ENST00000520679 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
EXTL3-207ENST00000520679 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 UBE3BQ7Z3V4 1068 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
EXTL3-207ENST00000520679 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 ATRNO75882 1429 aa17.36■□□□□ 0.37
EXTL3-207ENST00000520679 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
EXTL3-207ENST00000520679 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
EXTL3-207ENST00000520679 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
EXTL3-207ENST00000520679 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
EXTL3-207ENST00000520679 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
EXTL3-207ENST00000520679 SIK1P57059 783 aa17.34■□□□□ 0.37
EXTL3-207ENST00000520679 FOXO4P98177 505 aa17.34■□□□□ 0.37
EXTL3-207ENST00000520679 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms