RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
SSBP2-212ENST00000509053 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
SSBP2-212ENST00000509053 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
SSBP2-212ENST00000509053 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
SSBP2-212ENST00000509053 ZNF853P0CG23 659 aa10.67□□□□□ -0.7
SSBP2-212ENST00000509053 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
SSBP2-212ENST00000509053 TSR2Q969E8 191 aaKnown RBP10.67□□□□□ -0.7
SSBP2-212ENST00000509053 SLC52A2Q9HAB3 445 aa10.67□□□□□ -0.7
SSBP2-212ENST00000509053 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
SSBP2-212ENST00000509053 BTAF1O14981 1849 aa10.67□□□□□ -0.7
SSBP2-212ENST00000509053 KCNQ3O43525 872 aa10.66□□□□□ -0.7
SSBP2-212ENST00000509053 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
SSBP2-212ENST00000509053 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
SSBP2-212ENST00000509053 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
SSBP2-212ENST00000509053 SLFN5Q08AF3 891 aa10.66□□□□□ -0.7
SSBP2-212ENST00000509053 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 BCL9O00512 1426 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 ERVV-2B6SEH9 535 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 CABP4P57796 275 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 TEFQ10587 303 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 SLC39A6Q13433 755 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 TAF7Q15545 349 aaPredicted RBP10.65□□□□□ -0.7
SSBP2-212ENST00000509053 TRMT2AQ8IZ69 625 aaKnown RBP10.65□□□□□ -0.7
SSBP2-212ENST00000509053 PIGBQ92521 554 aa10.65□□□□□ -0.7
SSBP2-212ENST00000509053 IL16Q14005 1332 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 CHL1O00533 1208 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 TMCO4Q5TGY1 634 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 FOXD4L5Q5VV16 416 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 FOXD4L4Q8WXT5 416 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 BCL11BQ9C0K0 894 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 MBIPQ9NS73 344 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 IFT57Q9NWB7 429 aa10.64□□□□□ -0.71
SSBP2-212ENST00000509053 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
SSBP2-212ENST00000509053 BTBD11A6QL63 1104 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 KRT24Q2M2I5 525 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 BCCIPQ9P287 314 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSBP2-212ENST00000509053 C5P01031 1676 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 KCPQ6ZWJ8 1503 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 E9PSI1 815 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 GNAI1P63096 354 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 ASAP1Q9ULH1 1129 aa10.63□□□□□ -0.71
SSBP2-212ENST00000509053 MFAP1P55081 439 aaKnown RBP10.62□□□□□ -0.71
SSBP2-212ENST00000509053 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
SSBP2-212ENST00000509053 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
SSBP2-212ENST00000509053 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
SSBP2-212ENST00000509053 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
SSBP2-212ENST00000509053 TRIM37O94972 964 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 PSEN1P49768 467 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
SSBP2-212ENST00000509053 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
SSBP2-212ENST00000509053 GSE1Q14687 1217 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 ZNF790Q6PG37 636 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 CCDC82Q8N4S0 544 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 TSPYL6Q8N831 410 aa10.61□□□□□ -0.71
SSBP2-212ENST00000509053 LY75O60449 1722 aa10.6□□□□□ -0.71
SSBP2-212ENST00000509053 TJP1Q07157 1748 aa10.6□□□□□ -0.71
SSBP2-212ENST00000509053 PRAMEF22A3QJZ6 481 aa10.6□□□□□ -0.71
SSBP2-212ENST00000509053 EIF4A1P60842 406 aaKnown RBP10.6□□□□□ -0.71
SSBP2-212ENST00000509053 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
SSBP2-212ENST00000509053 C8orf58Q8NAV2 365 aa10.6□□□□□ -0.71
SSBP2-212ENST00000509053 ELL2O00472 640 aaPredicted RBP10.59□□□□□ -0.71
SSBP2-212ENST00000509053 ZNF496Q96IT1 587 aaPredicted RBP10.59□□□□□ -0.71
SSBP2-212ENST00000509053 SLC4A9Q96Q91 983 aa10.59□□□□□ -0.71
SSBP2-212ENST00000509053 MYH16Q9H6N6 1097 aa10.59□□□□□ -0.71
SSBP2-212ENST00000509053 BABAM1Q9NWV8 329 aa10.59□□□□□ -0.71
SSBP2-212ENST00000509053 HEG1Q9ULI3 1381 aa10.59□□□□□ -0.71
SSBP2-212ENST00000509053 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
SSBP2-212ENST00000509053 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
SSBP2-212ENST00000509053 LAMB4A4D0S4 1761 aa10.58□□□□□ -0.72
SSBP2-212ENST00000509053 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
SSBP2-212ENST00000509053 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
SSBP2-212ENST00000509053 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
SSBP2-212ENST00000509053 TAF1LQ8IZX4 1826 aa10.57□□□□□ -0.72
SSBP2-212ENST00000509053 KCNQ4P56696 695 aa10.57□□□□□ -0.72
SSBP2-212ENST00000509053 TTC5Q8N0Z6 440 aa10.57□□□□□ -0.72
SSBP2-212ENST00000509053 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
SSBP2-212ENST00000509053 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
SSBP2-212ENST00000509053 VAMP4O75379 141 aa10.56□□□□□ -0.72
SSBP2-212ENST00000509053 GIGYF1O75420 1035 aaPredicted RBP10.56□□□□□ -0.72
SSBP2-212ENST00000509053 FMNL2Q96PY5 1086 aa10.56□□□□□ -0.72
SSBP2-212ENST00000509053 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
SSBP2-212ENST00000509053 MYH14Q7Z406 1995 aaKnown RBP10.55□□□□□ -0.72
SSBP2-212ENST00000509053 TCERG1O14776 1098 aaKnown RBP10.55□□□□□ -0.72
SSBP2-212ENST00000509053 ITPK1Q13572 414 aa10.55□□□□□ -0.72
SSBP2-212ENST00000509053 TWISTNBQ3B726 338 aaPredicted RBP10.55□□□□□ -0.72
SSBP2-212ENST00000509053 USP16Q9Y5T5 823 aa10.55□□□□□ -0.72
SSBP2-212ENST00000509053 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
SSBP2-212ENST00000509053 SIK1P57059 783 aa10.54□□□□□ -0.72
SSBP2-212ENST00000509053 DNAJC10Q8IXB1 793 aa10.54□□□□□ -0.72
SSBP2-212ENST00000509053 APBA3O96018 575 aa10.53□□□□□ -0.72
SSBP2-212ENST00000509053 PIP4K2AP48426 406 aaPredicted RBP10.53□□□□□ -0.72
SSBP2-212ENST00000509053 SMARCC1Q92922 1105 aaPredicted RBP10.53□□□□□ -0.72
SSBP2-212ENST00000509053 LRRC4BQ9NT99 713 aa10.53□□□□□ -0.72
SSBP2-212ENST00000509053 RGPD3A6NKT7 1758 aaPredicted RBP10.53□□□□□ -0.72
SSBP2-212ENST00000509053 RGPD4Q7Z3J3 1758 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms