RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
LMNA-220ENST00000504687 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
LMNA-220ENST00000504687 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
LMNA-220ENST00000504687 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
LMNA-220ENST00000504687 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
LMNA-220ENST00000504687 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
LMNA-220ENST00000504687 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
LMNA-220ENST00000504687 ANKRD36CQ5JPF3 1778 aa16.52■□□□□ 0.24
LMNA-220ENST00000504687 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
LMNA-220ENST00000504687 A1BGP04217 495 aa16.52■□□□□ 0.24
LMNA-220ENST00000504687 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
LMNA-220ENST00000504687 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
LMNA-220ENST00000504687 GCKRQ14397 625 aa16.52■□□□□ 0.24
LMNA-220ENST00000504687 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.24
LMNA-220ENST00000504687 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
LMNA-220ENST00000504687 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.24
LMNA-220ENST00000504687 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
LMNA-220ENST00000504687 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
LMNA-220ENST00000504687 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
LMNA-220ENST00000504687 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
LMNA-220ENST00000504687 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
LMNA-220ENST00000504687 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
LMNA-220ENST00000504687 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
LMNA-220ENST00000504687 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
LMNA-220ENST00000504687 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
LMNA-220ENST00000504687 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
LMNA-220ENST00000504687 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
LMNA-220ENST00000504687 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
LMNA-220ENST00000504687 MYD88Q99836 296 aa16.49■□□□□ 0.23
LMNA-220ENST00000504687 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
LMNA-220ENST00000504687 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
LMNA-220ENST00000504687 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
LMNA-220ENST00000504687 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
LMNA-220ENST00000504687 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
LMNA-220ENST00000504687 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
LMNA-220ENST00000504687 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
LMNA-220ENST00000504687 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
LMNA-220ENST00000504687 SALL3Q9BXA9 1300 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 H7C1W4 665 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 EIF5BO60841 1220 aaKnown RBP16.47■□□□□ 0.23
LMNA-220ENST00000504687 CASP7P55210 303 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 RABL6Q3YEC7 729 aaPredicted RBP16.47■□□□□ 0.23
LMNA-220ENST00000504687 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
LMNA-220ENST00000504687 AOX1Q06278 1338 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 LY75O60449 1722 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 ERVV-1B6SEH8 477 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 RGL2O15211 777 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
LMNA-220ENST00000504687 BTAF1O14981 1849 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 PALLDQ8WX93 1383 aa16.46■□□□□ 0.23
LMNA-220ENST00000504687 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.22
LMNA-220ENST00000504687 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 NUP98P52948 1817 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
LMNA-220ENST00000504687 SIK1P57059 783 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 HSP90AB3PQ58FF7 597 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 KIF6Q6ZMV9 814 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
LMNA-220ENST00000504687 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
LMNA-220ENST00000504687 RXRBP28702 533 aa16.44■□□□□ 0.22
LMNA-220ENST00000504687 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
LMNA-220ENST00000504687 ERC1Q8IUD2 1116 aa16.44■□□□□ 0.22
LMNA-220ENST00000504687 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
LMNA-220ENST00000504687 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
LMNA-220ENST00000504687 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
LMNA-220ENST00000504687 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
LMNA-220ENST00000504687 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
LMNA-220ENST00000504687 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
LMNA-220ENST00000504687 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
LMNA-220ENST00000504687 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
LMNA-220ENST00000504687 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
LMNA-220ENST00000504687 A0A087WZG4 1122 aa16.42■□□□□ 0.22
LMNA-220ENST00000504687 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
LMNA-220ENST00000504687 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
LMNA-220ENST00000504687 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
LMNA-220ENST00000504687 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
LMNA-220ENST00000504687 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
LMNA-220ENST00000504687 USP42Q9H9J4 1324 aaKnown RBP16.42■□□□□ 0.22
LMNA-220ENST00000504687 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
LMNA-220ENST00000504687 PDE1AP54750 535 aa16.41■□□□□ 0.22
LMNA-220ENST00000504687 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
LMNA-220ENST00000504687 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
LMNA-220ENST00000504687 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
LMNA-220ENST00000504687 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
LMNA-220ENST00000504687 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
LMNA-220ENST00000504687 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
LMNA-220ENST00000504687 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
LMNA-220ENST00000504687 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
LMNA-220ENST00000504687 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
LMNA-220ENST00000504687 KCNQ2O43526 872 aa16.39■□□□□ 0.21
LMNA-220ENST00000504687 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
LMNA-220ENST00000504687 ITPK1Q13572 414 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms