RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NBPF15Q8N660 670 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 PLBD2Q8NHP8 589 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 UPF2Q9HAU5 1272 aaKnown RBP27.27■■□□□ 1.96
PTPN13-205ENST00000502971 ATG3Q9NT62 314 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 PIP4K2AP48426 406 aaPredicted RBP27.27■■□□□ 1.96
PTPN13-205ENST00000502971 DDRGK1Q96HY6 314 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 ASAP1Q9ULH1 1129 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 EXOC6BQ9Y2D4 811 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 NEURL1BA8MQ27 555 aa27.26■■□□□ 1.95
PTPN13-205ENST00000502971 LRRCC1Q9C099 1032 aa27.26■■□□□ 1.95
PTPN13-205ENST00000502971 APBB1O00213 710 aa27.25■■□□□ 1.95
PTPN13-205ENST00000502971 SMARCA5O60264 1052 aaPredicted RBP27.25■■□□□ 1.95
PTPN13-205ENST00000502971 RAB11FIP3O75154 756 aa27.25■■□□□ 1.95
PTPN13-205ENST00000502971 MYD88Q99836 296 aa27.25■■□□□ 1.95
PTPN13-205ENST00000502971 SRGAP3O43295 1099 aa27.24■■□□□ 1.95
PTPN13-205ENST00000502971 C16orf71Q8IYS4 520 aaPredicted RBP27.24■■□□□ 1.95
PTPN13-205ENST00000502971 A1BGP04217 495 aa27.24■■□□□ 1.95
PTPN13-205ENST00000502971 THSD7AQ9UPZ6 1657 aa27.24■■□□□ 1.95
PTPN13-205ENST00000502971 GCKRQ14397 625 aa27.23■■□□□ 1.95
PTPN13-205ENST00000502971 ARFGEF2Q9Y6D5 1785 aa27.23■■□□□ 1.95
PTPN13-205ENST00000502971 DOT1LQ8TEK3 1739 aa27.22■■□□□ 1.95
PTPN13-205ENST00000502971 TTC22Q5TAA0 569 aa27.21■■□□□ 1.95
PTPN13-205ENST00000502971 HSP90AB4PQ58FF6 505 aa27.21■■□□□ 1.95
PTPN13-205ENST00000502971 OSBPL3Q9H4L5 887 aa27.21■■□□□ 1.95
PTPN13-205ENST00000502971 RBM6P78332 1123 aaKnown RBP27.2■■□□□ 1.94
PTPN13-205ENST00000502971 A0A0G2JS52 829 aa27.19■■□□□ 1.94
PTPN13-205ENST00000502971 SURF6O75683 361 aaKnown RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 STARD3NLO95772 234 aa27.19■■□□□ 1.94
PTPN13-205ENST00000502971 MYT1Q01538 1121 aa27.19■■□□□ 1.94
PTPN13-205ENST00000502971 OTUD7AQ8TE49 926 aaPredicted RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 PRIM1P49642 420 aaKnown RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 SUCLG2Q96I99 432 aa27.19■■□□□ 1.94
PTPN13-205ENST00000502971 RBM42Q9BTD8 480 aaKnown RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 RGS17Q9UGC6 210 aaPredicted RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 NOP58Q9Y2X3 529 aaKnown RBP27.19■■□□□ 1.94
PTPN13-205ENST00000502971 GSPT1P15170 499 aaKnown RBP27.18■■□□□ 1.94
PTPN13-205ENST00000502971 DNAJC10Q8IXB1 793 aa27.18■■□□□ 1.94
PTPN13-205ENST00000502971 MARCH10Q8NA82 808 aaPredicted RBP27.18■■□□□ 1.94
PTPN13-205ENST00000502971 SYTL4Q96C24 671 aaPredicted RBP27.17■■□□□ 1.94
PTPN13-205ENST00000502971 TTLL7Q6ZT98 887 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 KAZALD1Q96I82 304 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 COL15A1P39059 1388 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 NUP188Q5SRE5 1749 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 PDE1AP54750 535 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 SEPT12Q8IYM1 358 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 KIF1BPQ96EK5 621 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 TBC1D32Q96NH3 1257 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 SALL3Q9BXA9 1300 aa27.16■■□□□ 1.94
PTPN13-205ENST00000502971 EIF5BO60841 1220 aaKnown RBP27.15■■□□□ 1.94
PTPN13-205ENST00000502971 BCL11AQ9H165 835 aa27.15■■□□□ 1.94
PTPN13-205ENST00000502971 AFDNP55196 1824 aaKnown RBP27.15■■□□□ 1.94
PTPN13-205ENST00000502971 CDC45O75419 566 aa27.14■■□□□ 1.94
PTPN13-205ENST00000502971 RHPN1Q8TCX5 695 aa27.14■■□□□ 1.94
PTPN13-205ENST00000502971 BICC1Q9H694 974 aaKnown RBP27.14■■□□□ 1.94
PTPN13-205ENST00000502971 MFAP1P55081 439 aaKnown RBP27.12■■□□□ 1.93
PTPN13-205ENST00000502971 STAP2Q9UGK3 403 aa27.12■■□□□ 1.93
PTPN13-205ENST00000502971 ATP5J2-PTCD1G3V325 749 aa27.11■■□□□ 1.93
PTPN13-205ENST00000502971 MX1P20591 662 aa27.11■■□□□ 1.93
PTPN13-205ENST00000502971 TBC1D9Q6ZT07 1266 aa27.11■■□□□ 1.93
PTPN13-205ENST00000502971 ERC1Q8IUD2 1116 aa27.11■■□□□ 1.93
PTPN13-205ENST00000502971 AOX1Q06278 1338 aa27.11■■□□□ 1.93
PTPN13-205ENST00000502971 CYP19A1P11511 503 aaPredicted RBP27.1■■□□□ 1.93
PTPN13-205ENST00000502971 RXRBP28702 533 aa27.1■■□□□ 1.93
PTPN13-205ENST00000502971 SLC4A9Q96Q91 983 aa27.1■■□□□ 1.93
PTPN13-205ENST00000502971 A0A087WZG4 1122 aa27.1■■□□□ 1.93
PTPN13-205ENST00000502971 ERICH6Q7L0X2 663 aa27.1■■□□□ 1.93
PTPN13-205ENST00000502971 CWC25Q9NXE8 425 aaPredicted RBP27.1■■□□□ 1.93
PTPN13-205ENST00000502971 CCDC191Q8NCU4 936 aa27.09■■□□□ 1.93
PTPN13-205ENST00000502971 C22orf23Q9BZE7 217 aa27.09■■□□□ 1.93
PTPN13-205ENST00000502971 ZBTB3Q9H5J0 574 aa27.09■■□□□ 1.93
PTPN13-205ENST00000502971 KAT6BQ8WYB5 2073 aa27.09■■□□□ 1.93
PTPN13-205ENST00000502971 SDSP20132 328 aa27.08■■□□□ 1.93
PTPN13-205ENST00000502971 OS9Q13438 667 aaPredicted RBP27.08■■□□□ 1.93
PTPN13-205ENST00000502971 KIF6Q6ZMV9 814 aa27.08■■□□□ 1.93
PTPN13-205ENST00000502971 H7C1W4 665 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 CASP7P55210 303 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 UBE3BQ7Z3V4 1068 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 IL1RAPL2Q9NP60 686 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 TJP1Q07157 1748 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 RABL6Q3YEC7 729 aaPredicted RBP27.07■■□□□ 1.92
PTPN13-205ENST00000502971 ACSBG1Q96GR2 724 aa27.07■■□□□ 1.92
PTPN13-205ENST00000502971 CICQ96RK0 1608 aaPredicted RBP27.06■■□□□ 1.92
PTPN13-205ENST00000502971 EPHA10Q5JZY3 1008 aa27.05■■□□□ 1.92
PTPN13-205ENST00000502971 TCIRG1Q13488 830 aa27.04■■□□□ 1.92
PTPN13-205ENST00000502971 CASC1Q6TDU7 716 aa27.04■■□□□ 1.92
PTPN13-205ENST00000502971 ISCA1Q9BUE6 129 aa27.04■■□□□ 1.92
PTPN13-205ENST00000502971 TRIM28Q13263 835 aaKnown RBP27.04■■□□□ 1.92
PTPN13-205ENST00000502971 G3BP1Q13283 466 aaKnown RBP eCLIP27.04■■□□□ 1.92
PTPN13-205ENST00000502971 PA2G4Q9UQ80 394 aaKnown RBP27.04■■□□□ 1.92
PTPN13-205ENST00000502971 KRT27Q7Z3Y8 459 aa27.03■■□□□ 1.92
PTPN13-205ENST00000502971 SMARCC1Q92922 1105 aaPredicted RBP27.03■■□□□ 1.92
PTPN13-205ENST00000502971 ZNF330Q9Y3S2 320 aaPredicted RBP27.03■■□□□ 1.92
PTPN13-205ENST00000502971 MAP3K15Q6ZN16 1313 aa27.03■■□□□ 1.92
PTPN13-205ENST00000502971 POTEAQ6S8J7 498 aa27.02■■□□□ 1.92
PTPN13-205ENST00000502971 CLASRPQ8N2M8 674 aaKnown RBP27.02■■□□□ 1.92
PTPN13-205ENST00000502971 IL6STP40189 918 aaPredicted RBP27.02■■□□□ 1.92
PTPN13-205ENST00000502971 RBM25P49756 843 aaKnown RBP27.02■■□□□ 1.92
PTPN13-205ENST00000502971 NUTM1Q86Y26 1132 aa27.02■■□□□ 1.92
PTPN13-205ENST00000502971 JARID2Q92833 1246 aaPredicted RBP27.02■■□□□ 1.92
PTPN13-205ENST00000502971 DAXXQ9UER7 740 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms