RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 SIK1P57059 783 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-216ENST00000502848 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-216ENST00000502848 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
NR1I3-216ENST00000502848 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 MYL6BP14649 208 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
NR1I3-216ENST00000502848 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-216ENST00000502848 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
NR1I3-216ENST00000502848 ANXA1P04083 346 aa11.34□□□□□ -0.59
NR1I3-216ENST00000502848 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NR1I3-216ENST00000502848 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
NR1I3-216ENST00000502848 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
NR1I3-216ENST00000502848 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-216ENST00000502848 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
NR1I3-216ENST00000502848 BTAF1O14981 1849 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 GRM8O00222 908 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 A1BGP04217 495 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 ACSBG1Q96GR2 724 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NR1I3-216ENST00000502848 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 LY75O60449 1722 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 A0A087WZG4 1122 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 NUCB1Q02818 461 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
NR1I3-216ENST00000502848 GCKRQ14397 625 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
NR1I3-216ENST00000502848 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NR1I3-216ENST00000502848 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
NR1I3-216ENST00000502848 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-216ENST00000502848 KCNQ2O43526 872 aa11.31□□□□□ -0.6
NR1I3-216ENST00000502848 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
NR1I3-216ENST00000502848 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
NR1I3-216ENST00000502848 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NR1I3-216ENST00000502848 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
NR1I3-216ENST00000502848 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
NR1I3-216ENST00000502848 POLA2Q14181 598 aa11.3□□□□□ -0.6
NR1I3-216ENST00000502848 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
NR1I3-216ENST00000502848 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
NR1I3-216ENST00000502848 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-216ENST00000502848 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-216ENST00000502848 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-216ENST00000502848 RXRBP28702 533 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 MYD88Q99836 296 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
NR1I3-216ENST00000502848 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NR1I3-216ENST00000502848 H7C1W4 665 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 ABCB7O75027 752 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
NR1I3-216ENST00000502848 ITPK1Q13572 414 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
NR1I3-216ENST00000502848 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-216ENST00000502848 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
NR1I3-216ENST00000502848 AK7Q96M32 723 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
NR1I3-216ENST00000502848 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
NR1I3-216ENST00000502848 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-216ENST00000502848 CASP7P55210 303 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-216ENST00000502848 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
NR1I3-216ENST00000502848 PLSCR1O15162 318 aa11.26□□□□□ -0.61
NR1I3-216ENST00000502848 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
NR1I3-216ENST00000502848 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-216ENST00000502848 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms