RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
COL15A1-204ENST00000496686 TTC22Q5TAA0 569 aa18.84■□□□□ 0.61
COL15A1-204ENST00000496686 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
COL15A1-204ENST00000496686 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
COL15A1-204ENST00000496686 NOP58Q9Y2X3 529 aaKnown RBP18.84■□□□□ 0.61
COL15A1-204ENST00000496686 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
COL15A1-204ENST00000496686 NUP188Q5SRE5 1749 aa18.83■□□□□ 0.61
COL15A1-204ENST00000496686 A1BGP04217 495 aa18.83■□□□□ 0.6
COL15A1-204ENST00000496686 DNAJC10Q8IXB1 793 aa18.83■□□□□ 0.6
COL15A1-204ENST00000496686 C8orf37Q96NL8 207 aa18.83■□□□□ 0.6
COL15A1-204ENST00000496686 CICQ96RK0 1608 aaPredicted RBP18.82■□□□□ 0.6
COL15A1-204ENST00000496686 AOX1Q06278 1338 aa18.82■□□□□ 0.6
COL15A1-204ENST00000496686 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
COL15A1-204ENST00000496686 MARCH10Q8NA82 808 aaPredicted RBP18.82■□□□□ 0.6
COL15A1-204ENST00000496686 SUCLG2Q96I99 432 aa18.82■□□□□ 0.6
COL15A1-204ENST00000496686 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
COL15A1-204ENST00000496686 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
COL15A1-204ENST00000496686 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
COL15A1-204ENST00000496686 ERC1Q8IUD2 1116 aa18.81■□□□□ 0.6
COL15A1-204ENST00000496686 KIF1BPQ96EK5 621 aa18.81■□□□□ 0.6
COL15A1-204ENST00000496686 CDC45O75419 566 aa18.8■□□□□ 0.6
COL15A1-204ENST00000496686 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
COL15A1-204ENST00000496686 SEC24BO95487 1268 aa18.8■□□□□ 0.6
COL15A1-204ENST00000496686 TTLL7Q6ZT98 887 aa18.8■□□□□ 0.6
COL15A1-204ENST00000496686 C16orf71Q8IYS4 520 aaPredicted RBP18.8■□□□□ 0.6
COL15A1-204ENST00000496686 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
COL15A1-204ENST00000496686 STAP2Q9UGK3 403 aa18.8■□□□□ 0.6
COL15A1-204ENST00000496686 APBB1O00213 710 aa18.79■□□□□ 0.6
COL15A1-204ENST00000496686 GSPT1P15170 499 aaKnown RBP18.79■□□□□ 0.6
COL15A1-204ENST00000496686 KAZALD1Q96I82 304 aa18.79■□□□□ 0.6
COL15A1-204ENST00000496686 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
COL15A1-204ENST00000496686 TJP1Q07157 1748 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 MSH5O43196 834 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 CYP19A1P11511 503 aaPredicted RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 PDE1AP54750 535 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 KIF6Q6ZMV9 814 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 CCDC191Q8NCU4 936 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
COL15A1-204ENST00000496686 OTUD7AQ8TE49 926 aaPredicted RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 SMARCC1Q92922 1105 aaPredicted RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 CWC25Q9NXE8 425 aaPredicted RBP18.78■□□□□ 0.6
COL15A1-204ENST00000496686 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
COL15A1-204ENST00000496686 H7C1W4 665 aa18.77■□□□□ 0.6
COL15A1-204ENST00000496686 CASP7P55210 303 aa18.77■□□□□ 0.6
COL15A1-204ENST00000496686 TRIM28Q13263 835 aaKnown RBP18.77■□□□□ 0.6
COL15A1-204ENST00000496686 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
COL15A1-204ENST00000496686 SLC4A9Q96Q91 983 aa18.77■□□□□ 0.6
COL15A1-204ENST00000496686 USP21Q9UK80 565 aa18.77■□□□□ 0.6
COL15A1-204ENST00000496686 AFDNP55196 1824 aaKnown RBP18.77■□□□□ 0.59
COL15A1-204ENST00000496686 MX1P20591 662 aa18.76■□□□□ 0.59
COL15A1-204ENST00000496686 ISCA1Q9BUE6 129 aa18.76■□□□□ 0.59
COL15A1-204ENST00000496686 A0A087WZG4 1122 aa18.75■□□□□ 0.59
COL15A1-204ENST00000496686 IL6STP40189 918 aaPredicted RBP18.75■□□□□ 0.59
COL15A1-204ENST00000496686 TCIRG1Q13488 830 aa18.75■□□□□ 0.59
COL15A1-204ENST00000496686 FAM98CQ17RN3 349 aaKnown RBP18.75■□□□□ 0.59
COL15A1-204ENST00000496686 HSP90AB3PQ58FF7 597 aa18.75■□□□□ 0.59
COL15A1-204ENST00000496686 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
COL15A1-204ENST00000496686 ZNF831Q5JPB2 1677 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 RREB1Q92766 1687 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 ATP5J2-PTCD1G3V325 749 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 HSPA1LP34931 641 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 TBC1D9Q6ZT07 1266 aa18.74■□□□□ 0.59
COL15A1-204ENST00000496686 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
COL15A1-204ENST00000496686 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
COL15A1-204ENST00000496686 UBE3BQ7Z3V4 1068 aa18.73■□□□□ 0.59
COL15A1-204ENST00000496686 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
COL15A1-204ENST00000496686 SDSP20132 328 aa18.72■□□□□ 0.59
COL15A1-204ENST00000496686 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
COL15A1-204ENST00000496686 MEX3CQ5U5Q3 659 aaKnown RBP18.72■□□□□ 0.59
COL15A1-204ENST00000496686 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
COL15A1-204ENST00000496686 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
COL15A1-204ENST00000496686 ATRNO75882 1429 aa18.72■□□□□ 0.59
COL15A1-204ENST00000496686 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
COL15A1-204ENST00000496686 ERVV-1B6SEH8 477 aa18.71■□□□□ 0.59
COL15A1-204ENST00000496686 G3BP1Q13283 466 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL15A1-204ENST00000496686 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
COL15A1-204ENST00000496686 CLASRPQ8N2M8 674 aaKnown RBP18.71■□□□□ 0.59
COL15A1-204ENST00000496686 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
COL15A1-204ENST00000496686 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
COL15A1-204ENST00000496686 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 RBM25P49756 843 aaKnown RBP18.7■□□□□ 0.58
COL15A1-204ENST00000496686 SIK1P57059 783 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 EPHA10Q5JZY3 1008 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 IL1RAPL2Q9NP60 686 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
COL15A1-204ENST00000496686 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
COL15A1-204ENST00000496686 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
COL15A1-204ENST00000496686 PCCAP05165 728 aaPredicted RBP18.68■□□□□ 0.58
COL15A1-204ENST00000496686 FOXO4P98177 505 aa18.68■□□□□ 0.58
COL15A1-204ENST00000496686 GPATCH3Q96I76 525 aa18.68■□□□□ 0.58
COL15A1-204ENST00000496686 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
COL15A1-204ENST00000496686 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
COL15A1-204ENST00000496686 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
COL15A1-204ENST00000496686 AFF2P51816 1311 aa18.68■□□□□ 0.58
COL15A1-204ENST00000496686 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
COL15A1-204ENST00000496686 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms