RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 MYO6Q9UM54 1294 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 MCM3P25205 808 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
PKD1-222ENST00000496574 KIAA1328Q86T90 577 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 AMOTL1Q8IY63 956 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 SRRTQ9BXP5 876 aaKnown RBP16.44■□□□□ 0.22
PKD1-222ENST00000496574 EPS15P42566 896 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 LUC7LQ9NQ29 371 aaKnown RBP16.44■□□□□ 0.22
PKD1-222ENST00000496574 AK2P54819 239 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 CCT2P78371 535 aaKnown RBP16.44■□□□□ 0.22
PKD1-222ENST00000496574 DNAAF4Q8WXU2 420 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
PKD1-222ENST00000496574 FYB1O15117 783 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
PKD1-222ENST00000496574 GIMAP7Q8NHV1 300 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
PKD1-222ENST00000496574 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 NOS1P29475 1434 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
PKD1-222ENST00000496574 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 IVLP07476 585 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 CHMLP26374 656 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 AOPEPQ8N6M6 819 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
PKD1-222ENST00000496574 NEK1Q96PY6 1258 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
PKD1-222ENST00000496574 MYL6BP14649 208 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
PKD1-222ENST00000496574 MCM6Q14566 821 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 UBASH3AP57075 661 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 GPATCH11Q8N954 259 aa16.41■□□□□ 0.22
PKD1-222ENST00000496574 ISM2Q6H9L7 571 aa16.4■□□□□ 0.22
PKD1-222ENST00000496574 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
PKD1-222ENST00000496574 WASF1Q92558 559 aa16.4■□□□□ 0.22
PKD1-222ENST00000496574 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
PKD1-222ENST00000496574 GTF2A1P52655 376 aaPredicted RBP16.4■□□□□ 0.22
PKD1-222ENST00000496574 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
PKD1-222ENST00000496574 FBLN1P23142 703 aa16.4■□□□□ 0.22
PKD1-222ENST00000496574 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
PKD1-222ENST00000496574 GOLGA6L7A0A1B0GV03 622 aa16.39■□□□□ 0.22
PKD1-222ENST00000496574 NUP133Q8WUM0 1156 aa16.39■□□□□ 0.22
PKD1-222ENST00000496574 ERLIN2O94905 339 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 SYT10Q6XYQ8 523 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 GTF3C6Q969F1 213 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 BRF1Q92994 677 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
PKD1-222ENST00000496574 BRD1O95696 1058 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
PKD1-222ENST00000496574 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
PKD1-222ENST00000496574 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
PKD1-222ENST00000496574 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
PKD1-222ENST00000496574 MRPS27Q92552 414 aaKnown RBP16.38■□□□□ 0.21
PKD1-222ENST00000496574 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
PKD1-222ENST00000496574 POLR3DP05423 398 aaPredicted RBP16.38■□□□□ 0.21
PKD1-222ENST00000496574 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
PKD1-222ENST00000496574 CAPN2P17655 700 aa16.38■□□□□ 0.21
PKD1-222ENST00000496574 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
PKD1-222ENST00000496574 CTR9Q6PD62 1173 aa16.37■□□□□ 0.21
PKD1-222ENST00000496574 RSPH14Q9UHP6 348 aa16.37■□□□□ 0.21
PKD1-222ENST00000496574 PPFIA3O75145 1194 aa16.37■□□□□ 0.21
PKD1-222ENST00000496574 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
PKD1-222ENST00000496574 MNAT1P51948 309 aa16.37■□□□□ 0.21
PKD1-222ENST00000496574 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
PKD1-222ENST00000496574 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
PKD1-222ENST00000496574 GOLGA8BA8MQT2 603 aa16.36■□□□□ 0.21
PKD1-222ENST00000496574 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
PKD1-222ENST00000496574 PKP1Q13835 747 aa16.36■□□□□ 0.21
PKD1-222ENST00000496574 RASSF4Q9H2L5 321 aa16.36■□□□□ 0.21
PKD1-222ENST00000496574 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
PKD1-222ENST00000496574 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
PKD1-222ENST00000496574 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
PKD1-222ENST00000496574 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
PKD1-222ENST00000496574 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
PKD1-222ENST00000496574 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 SPA17Q15506 151 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
PKD1-222ENST00000496574 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 MICALCLQ6ZW33 695 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
PKD1-222ENST00000496574 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
PKD1-222ENST00000496574 SYKP43405 635 aa16.34■□□□□ 0.21
PKD1-222ENST00000496574 PLCD4Q9BRC7 762 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms