RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 NBPF14Q5TI25 921 aa14.31□□□□□ -0.12
HDLBP-245ENST00000494862 NBPF10Q6P3W6 841 aaKnown RBP14.31□□□□□ -0.12
HDLBP-245ENST00000494862 ANKRD13DQ6ZTN6 518 aa14.31□□□□□ -0.12
HDLBP-245ENST00000494862 NBPF15Q8N660 670 aa14.31□□□□□ -0.12
HDLBP-245ENST00000494862 PRIM1P49642 420 aaKnown RBP14.3□□□□□ -0.12
HDLBP-245ENST00000494862 MARCH10Q8NA82 808 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-245ENST00000494862 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-245ENST00000494862 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-245ENST00000494862 UTYO14607 1347 aa14.3□□□□□ -0.12
HDLBP-245ENST00000494862 STARD3NLO95772 234 aa14.29□□□□□ -0.12
HDLBP-245ENST00000494862 A1BGP04217 495 aa14.29□□□□□ -0.12
HDLBP-245ENST00000494862 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
HDLBP-245ENST00000494862 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-245ENST00000494862 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-245ENST00000494862 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
HDLBP-245ENST00000494862 USP21Q9UK80 565 aa14.29□□□□□ -0.12
HDLBP-245ENST00000494862 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 NEURL1BA8MQ27 555 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 GRM8O00222 908 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 CWF19L2Q2TBE0 894 aaKnown RBP14.28□□□□□ -0.12
HDLBP-245ENST00000494862 DNAJC10Q8IXB1 793 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 MYD88Q99836 296 aa14.28□□□□□ -0.12
HDLBP-245ENST00000494862 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
HDLBP-245ENST00000494862 ITGB4P16144 1822 aa14.27□□□□□ -0.12
HDLBP-245ENST00000494862 MTX1Q13505 466 aa14.27□□□□□ -0.13
HDLBP-245ENST00000494862 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
HDLBP-245ENST00000494862 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
HDLBP-245ENST00000494862 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
HDLBP-245ENST00000494862 SYTL4Q96C24 671 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-245ENST00000494862 GCKRQ14397 625 aa14.26□□□□□ -0.13
HDLBP-245ENST00000494862 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.25□□□□□ -0.13
HDLBP-245ENST00000494862 RAB11FIP3O75154 756 aa14.25□□□□□ -0.13
HDLBP-245ENST00000494862 ANP32AP39687 249 aaKnown RBP14.25□□□□□ -0.13
HDLBP-245ENST00000494862 BMP2KLQ5H9B9 411 aa14.25□□□□□ -0.13
HDLBP-245ENST00000494862 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
HDLBP-245ENST00000494862 TTLL7Q6ZT98 887 aa14.25□□□□□ -0.13
HDLBP-245ENST00000494862 SLC4A9Q96Q91 983 aa14.25□□□□□ -0.13
HDLBP-245ENST00000494862 DOT1LQ8TEK3 1739 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 CYP19A1P11511 503 aaPredicted RBP14.24□□□□□ -0.13
HDLBP-245ENST00000494862 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 ACSBG1Q96GR2 724 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 SUCLG2Q96I99 432 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
HDLBP-245ENST00000494862 COL15A1P39059 1388 aa14.23□□□□□ -0.13
HDLBP-245ENST00000494862 SMARCA5O60264 1052 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-245ENST00000494862 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
HDLBP-245ENST00000494862 SMARCC1Q92922 1105 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-245ENST00000494862 LRRCC1Q9C099 1032 aa14.23□□□□□ -0.13
HDLBP-245ENST00000494862 NOP58Q9Y2X3 529 aaKnown RBP14.23□□□□□ -0.13
HDLBP-245ENST00000494862 SRCAPQ6ZRS2 3230 aa14.23□□□□□ -0.13
HDLBP-245ENST00000494862 APBB1O00213 710 aa14.22□□□□□ -0.13
HDLBP-245ENST00000494862 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-245ENST00000494862 AFF2P51816 1311 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 A0A0G2JS52 829 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 ATP5J2-PTCD1G3V325 749 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
HDLBP-245ENST00000494862 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 KAZALD1Q96I82 304 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 GJD4Q96KN9 370 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-245ENST00000494862 CWC25Q9NXE8 425 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-245ENST00000494862 ATRNO75882 1429 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 ARFGEF2Q9Y6D5 1785 aa14.21□□□□□ -0.13
HDLBP-245ENST00000494862 H7C1W4 665 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 OSBPL3Q9H4L5 887 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 ZBTB3Q9H5J0 574 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
HDLBP-245ENST00000494862 TRPC5Q9UL62 973 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-245ENST00000494862 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
HDLBP-245ENST00000494862 A0A087WZG4 1122 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 LOC102724428A0A0B4J2F2 783 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 IL6STP40189 918 aaPredicted RBP14.19□□□□□ -0.14
HDLBP-245ENST00000494862 CASP7P55210 303 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 SIK1P57059 783 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 MYT1Q01538 1121 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
HDLBP-245ENST00000494862 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 TTC22Q5TAA0 569 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
HDLBP-245ENST00000494862 OTUD7AQ8TE49 926 aaPredicted RBP14.19□□□□□ -0.14
HDLBP-245ENST00000494862 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 PALLDQ8WX93 1383 aa14.19□□□□□ -0.14
HDLBP-245ENST00000494862 MAP3K15Q6ZN16 1313 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 SALL3Q9BXA9 1300 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 KCNQ2O43526 872 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 ONECUT3O60422 494 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-245ENST00000494862 SEC24BO95487 1268 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 RABL6Q3YEC7 729 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-245ENST00000494862 UBE3BQ7Z3V4 1068 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 ZBTB1Q9Y2K1 713 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 TJP1Q07157 1748 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
HDLBP-245ENST00000494862 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
HDLBP-245ENST00000494862 ATP6V1AP38606 617 aa14.17□□□□□ -0.14
HDLBP-245ENST00000494862 PDE1AP54750 535 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms