RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
CLCN6-208ENST00000494028 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 KAZALD1Q96I82 304 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 MYD88Q99836 296 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
CLCN6-208ENST00000494028 BCORQ6W2J9 1755 aa13.15□□□□□ -0.31
CLCN6-208ENST00000494028 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
CLCN6-208ENST00000494028 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-208ENST00000494028 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-208ENST00000494028 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 LAMB2P55268 1798 aa13.14□□□□□ -0.31
CLCN6-208ENST00000494028 MYH3P11055 1940 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
CLCN6-208ENST00000494028 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 GCKRQ14397 625 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
CLCN6-208ENST00000494028 IL1RAPL2Q9NP60 686 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-208ENST00000494028 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 LRP5O75197 1615 aa13.13□□□□□ -0.31
CLCN6-208ENST00000494028 NUP98P52948 1817 aa13.12□□□□□ -0.31
CLCN6-208ENST00000494028 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
CLCN6-208ENST00000494028 KIF2CQ99661 725 aa13.12□□□□□ -0.31
CLCN6-208ENST00000494028 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
CLCN6-208ENST00000494028 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
CLCN6-208ENST00000494028 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
CLCN6-208ENST00000494028 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
CLCN6-208ENST00000494028 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
CLCN6-208ENST00000494028 CASP7P55210 303 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 NBR1Q14596 966 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 TTLL7Q6ZT98 887 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 PIGBQ92521 554 aa13.1□□□□□ -0.31
CLCN6-208ENST00000494028 PA2G4Q9UQ80 394 aaKnown RBP13.1□□□□□ -0.31
CLCN6-208ENST00000494028 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 A1BGP04217 495 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 RABL6Q3YEC7 729 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-208ENST00000494028 EPHA10Q5JZY3 1008 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 ERC1Q8IUD2 1116 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
CLCN6-208ENST00000494028 ADAMTS2O95450 1211 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 HSCBQ8IWL3 235 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 SNX21Q969T3 373 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
CLCN6-208ENST00000494028 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-208ENST00000494028 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-208ENST00000494028 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
CLCN6-208ENST00000494028 ESYT1Q9BSJ8 1104 aa13.07□□□□□ -0.32
CLCN6-208ENST00000494028 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-208ENST00000494028 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
CLCN6-208ENST00000494028 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
CLCN6-208ENST00000494028 ARAP2Q8WZ64 1704 aa13.07□□□□□ -0.32
CLCN6-208ENST00000494028 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
CLCN6-208ENST00000494028 BTAF1O14981 1849 aa13.06□□□□□ -0.32
CLCN6-208ENST00000494028 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
CLCN6-208ENST00000494028 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-208ENST00000494028 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-208ENST00000494028 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
CLCN6-208ENST00000494028 ERC2O15083 957 aa13.06□□□□□ -0.32
CLCN6-208ENST00000494028 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-208ENST00000494028 ZNF609O15014 1411 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
CLCN6-208ENST00000494028 KAT6BQ8WYB5 2073 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 SPEF2Q9C093 1822 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 SASH1O94885 1247 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 REC8O95072 547 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 CHMLP26374 656 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
CLCN6-208ENST00000494028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.05□□□□□ -0.32
CLCN6-208ENST00000494028 A0A087WZG4 1122 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 H7C1W4 665 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 EXOC5O00471 708 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 CD2BP2O95400 341 aaKnown RBP13.04□□□□□ -0.32
CLCN6-208ENST00000494028 CLASRPQ8N2M8 674 aaKnown RBP13.04□□□□□ -0.32
CLCN6-208ENST00000494028 JARID2Q92833 1246 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-208ENST00000494028 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
CLCN6-208ENST00000494028 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
CLCN6-208ENST00000494028 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms