RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 UNC5CLQ8IV45 518 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 CNTROBQ8N137 903 aa31.69■■■□□ 2.66
HLA-C-208ENST00000487245 CLCN1P35523 988 aa31.68■■■□□ 2.66
HLA-C-208ENST00000487245 LARP1Q6PKG0 1096 aaKnown RBP31.68■■■□□ 2.66
HLA-C-208ENST00000487245 DCAF5Q96JK2 942 aa31.68■■■□□ 2.66
HLA-C-208ENST00000487245 DDX17Q92841 729 aaKnown RBP31.67■■■□□ 2.66
HLA-C-208ENST00000487245 MEGF6O75095 1541 aa31.67■■■□□ 2.66
HLA-C-208ENST00000487245 GRM8O00222 908 aa31.67■■■□□ 2.66
HLA-C-208ENST00000487245 CLASRPQ8N2M8 674 aaKnown RBP31.67■■■□□ 2.66
HLA-C-208ENST00000487245 ANO8Q9HCE9 1232 aaPredicted RBP31.67■■■□□ 2.66
HLA-C-208ENST00000487245 PALD1Q9ULE6 856 aa31.66■■■□□ 2.66
HLA-C-208ENST00000487245 MRC1P22897 1456 aa31.66■■■□□ 2.66
HLA-C-208ENST00000487245 GLRX3O76003 335 aaKnown RBP31.65■■■□□ 2.66
HLA-C-208ENST00000487245 NFATC2IPQ8NCF5 419 aa31.65■■■□□ 2.66
HLA-C-208ENST00000487245 GPATCH3Q96I76 525 aa31.65■■■□□ 2.66
HLA-C-208ENST00000487245 CWF19L2Q2TBE0 894 aaKnown RBP31.64■■■□□ 2.66
HLA-C-208ENST00000487245 RIC3Q7Z5B4 369 aa31.64■■■□□ 2.66
HLA-C-208ENST00000487245 NEXNQ0ZGT2 675 aa31.63■■■□□ 2.65
HLA-C-208ENST00000487245 SLC39A6Q13433 755 aa31.63■■■□□ 2.65
HLA-C-208ENST00000487245 PKD1L3Q7Z443 1732 aa31.63■■■□□ 2.65
HLA-C-208ENST00000487245 HSPA4P34932 840 aa31.63■■■□□ 2.65
HLA-C-208ENST00000487245 SNRPA1P09661 255 aaKnown RBP31.62■■■□□ 2.65
HLA-C-208ENST00000487245 PPP1R9BQ96SB3 815 aa31.62■■■□□ 2.65
HLA-C-208ENST00000487245 AIMP1Q12904 312 aaKnown RBP31.61■■■□□ 2.65
HLA-C-208ENST00000487245 TTC5Q8N0Z6 440 aa31.61■■■□□ 2.65
HLA-C-208ENST00000487245 CABLES1Q8TDN4 633 aa31.61■■■□□ 2.65
HLA-C-208ENST00000487245 C5P01031 1676 aa31.61■■■□□ 2.65
HLA-C-208ENST00000487245 BRD1O95696 1058 aa31.61■■■□□ 2.65
HLA-C-208ENST00000487245 CCDC173Q0VFZ6 552 aa31.61■■■□□ 2.65
HLA-C-208ENST00000487245 SGSM2O43147 1006 aa31.59■■■□□ 2.65
HLA-C-208ENST00000487245 SUCLG2Q96I99 432 aa31.59■■■□□ 2.65
HLA-C-208ENST00000487245 ECHDC1Q9NTX5 307 aa31.59■■■□□ 2.65
HLA-C-208ENST00000487245 CHRNA2Q15822 529 aa31.59■■■□□ 2.65
HLA-C-208ENST00000487245 FMNL2Q96PY5 1086 aa31.59■■■□□ 2.65
HLA-C-208ENST00000487245 ZSCAN23Q3MJ62 389 aa31.58■■■□□ 2.65
HLA-C-208ENST00000487245 ZNF496Q96IT1 587 aaPredicted RBP31.58■■■□□ 2.65
HLA-C-208ENST00000487245 METTL22Q9BUU2 404 aaPredicted RBP31.58■■■□□ 2.65
HLA-C-208ENST00000487245 CYP27B1O15528 508 aa31.57■■■□□ 2.64
HLA-C-208ENST00000487245 IFIT2P09913 472 aaKnown RBP31.57■■■□□ 2.64
HLA-C-208ENST00000487245 NASPP49321 788 aaPredicted RBP31.57■■■□□ 2.64
HLA-C-208ENST00000487245 RUFY2Q8WXA3 655 aa31.57■■■□□ 2.64
HLA-C-208ENST00000487245 RAD50Q92878 1312 aa31.57■■■□□ 2.64
HLA-C-208ENST00000487245 G3BP1Q13283 466 aaKnown RBP eCLIP31.57■■■□□ 2.64
HLA-C-208ENST00000487245 XAGE3Q8WTP9 111 aa31.57■■■□□ 2.64
HLA-C-208ENST00000487245 IGKV5-2P06315 115 aa31.56■■■□□ 2.64
HLA-C-208ENST00000487245 ESPNB1AK53 854 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 PRPF40AO75400 957 aaKnown RBP31.55■■■□□ 2.64
HLA-C-208ENST00000487245 MAP4K4O95819 1239 aaPredicted RBP31.55■■■□□ 2.64
HLA-C-208ENST00000487245 CAVIN1Q6NZI2 390 aaKnown RBP31.55■■■□□ 2.64
HLA-C-208ENST00000487245 KAZALD1Q96I82 304 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 BICC1Q9H694 974 aaKnown RBP31.55■■■□□ 2.64
HLA-C-208ENST00000487245 NEURL1BA8MQ27 555 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 KIAA1211Q6ZU35 1233 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 COPS6Q7L5N1 327 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 GPT2Q8TD30 523 aa31.55■■■□□ 2.64
HLA-C-208ENST00000487245 MYL6BP14649 208 aa31.54■■■□□ 2.64
HLA-C-208ENST00000487245 CABP4P57796 275 aa31.54■■■□□ 2.64
HLA-C-208ENST00000487245 TRIM44Q96DX7 344 aaPredicted RBP31.54■■■□□ 2.64
HLA-C-208ENST00000487245 IL25Q9H293 177 aa31.54■■■□□ 2.64
HLA-C-208ENST00000487245 GCKRQ14397 625 aa31.53■■■□□ 2.64
HLA-C-208ENST00000487245 PA2G4Q9UQ80 394 aaKnown RBP31.53■■■□□ 2.64
HLA-C-208ENST00000487245 PARP4Q9UKK3 1724 aaKnown RBP31.53■■■□□ 2.64
HLA-C-208ENST00000487245 MBD3O95983 291 aa31.52■■■□□ 2.64
HLA-C-208ENST00000487245 ANKRD13DQ6ZTN6 518 aa31.52■■■□□ 2.64
HLA-C-208ENST00000487245 LSG1Q9H089 658 aaKnown RBP31.52■■■□□ 2.64
HLA-C-208ENST00000487245 BRINP3Q76B58 766 aa31.51■■■□□ 2.63
HLA-C-208ENST00000487245 ANP32BQ92688 251 aaKnown RBP31.5■■■□□ 2.63
HLA-C-208ENST00000487245 EVI5LQ96CN4 794 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 MYD88Q99836 296 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 DIAPH3Q9NSV4 1193 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 NCLP19338 710 aaKnown RBP31.5■■■□□ 2.63
HLA-C-208ENST00000487245 LRP10Q7Z4F1 713 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 AACSQ86V21 672 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 USP16Q9Y5T5 823 aa31.5■■■□□ 2.63
HLA-C-208ENST00000487245 XIRP1Q702N8 1843 aaKnown RBP31.49■■■□□ 2.63
HLA-C-208ENST00000487245 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.49■■■□□ 2.63
HLA-C-208ENST00000487245 COL15A1P39059 1388 aa31.49■■■□□ 2.63
HLA-C-208ENST00000487245 ERBB4Q15303 1308 aa31.49■■■□□ 2.63
HLA-C-208ENST00000487245 HIP1O00291 1037 aa31.48■■■□□ 2.63
HLA-C-208ENST00000487245 WDR17Q8IZU2 1322 aa31.47■■■□□ 2.63
HLA-C-208ENST00000487245 SASH1O94885 1247 aa31.47■■■□□ 2.63
HLA-C-208ENST00000487245 SNX14Q9Y5W7 946 aa31.47■■■□□ 2.63
HLA-C-208ENST00000487245 TTC14Q96N46 770 aa31.46■■■□□ 2.63
HLA-C-208ENST00000487245 UPF3BQ9BZI7 483 aaKnown RBP31.46■■■□□ 2.63
HLA-C-208ENST00000487245 HSPA2P54652 639 aa31.46■■■□□ 2.63
HLA-C-208ENST00000487245 CWC27Q6UX04 472 aaKnown RBP31.46■■■□□ 2.63
HLA-C-208ENST00000487245 PCDH11XQ9BZA7 1347 aa31.45■■■□□ 2.63
HLA-C-208ENST00000487245 PCDH11YQ9BZA8 1340 aa31.45■■■□□ 2.63
HLA-C-208ENST00000487245 LAMB4A4D0S4 1761 aa31.45■■■□□ 2.63
HLA-C-208ENST00000487245 PRDM11Q9NQV5 511 aa31.44■■■□□ 2.62
HLA-C-208ENST00000487245 WDR33Q9C0J8 1336 aaKnown RBP31.44■■■□□ 2.62
HLA-C-208ENST00000487245 ZCRB1Q8TBF4 217 aaKnown RBP31.44■■■□□ 2.62
HLA-C-208ENST00000487245 SOS2Q07890 1332 aaPredicted RBP31.43■■■□□ 2.62
HLA-C-208ENST00000487245 ERVV-2B6SEH9 535 aa31.43■■■□□ 2.62
HLA-C-208ENST00000487245 LRSAM1Q6UWE0 723 aa31.43■■■□□ 2.62
HLA-C-208ENST00000487245 PLBD2Q8NHP8 589 aa31.42■■■□□ 2.62
HLA-C-208ENST00000487245 EAF2Q96CJ1 260 aaPredicted RBP31.42■■■□□ 2.62
HLA-C-208ENST00000487245 COPRSQ9NQ92 184 aa31.42■■■□□ 2.62
HLA-C-208ENST00000487245 TMEM63CQ9P1W3 806 aa31.42■■■□□ 2.62
HLA-C-208ENST00000487245 HS1BP3Q53T59 392 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms