RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
VPS52-218ENST00000482399 MYL6BP14649 208 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 ZNF165P49910 485 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 TYRO3Q06418 890 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 CCDC112Q8NEF3 446 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 RAD50Q92878 1312 aa15.08■□□□□ 0.01
VPS52-218ENST00000482399 GORABQ5T7V8 394 aa15.08■□□□□ 0
VPS52-218ENST00000482399 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
VPS52-218ENST00000482399 KCNQ3O43525 872 aa15.08■□□□□ 0
VPS52-218ENST00000482399 ME3Q16798 604 aa15.08■□□□□ 0
VPS52-218ENST00000482399 RNF20Q5VTR2 975 aa15.08■□□□□ 0
VPS52-218ENST00000482399 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
VPS52-218ENST00000482399 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
VPS52-218ENST00000482399 CD163L1Q9NR16 1453 aa15.08■□□□□ 0
VPS52-218ENST00000482399 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
VPS52-218ENST00000482399 NAA30Q147X3 362 aaPredicted RBP15.07■□□□□ 0
VPS52-218ENST00000482399 ZBTB9Q96C00 473 aa15.07■□□□□ 0
VPS52-218ENST00000482399 ECHDC1Q9NTX5 307 aa15.07■□□□□ 0
VPS52-218ENST00000482399 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
VPS52-218ENST00000482399 ZNF330Q9Y3S2 320 aaPredicted RBP15.07■□□□□ 0
VPS52-218ENST00000482399 SF3A1Q15459 793 aaKnown RBP15.07■□□□□ 0
VPS52-218ENST00000482399 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
VPS52-218ENST00000482399 TTC6Q86TZ1 520 aa15.07■□□□□ 0
VPS52-218ENST00000482399 IL17REQ8NFR9 667 aa15.07■□□□□ 0
VPS52-218ENST00000482399 MTMR6Q9Y217 621 aa15.07■□□□□ 0
VPS52-218ENST00000482399 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
VPS52-218ENST00000482399 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
VPS52-218ENST00000482399 BTBD11A6QL63 1104 aa15.06■□□□□ 0
VPS52-218ENST00000482399 ATP2B3Q16720 1220 aa15.06■□□□□ 0
VPS52-218ENST00000482399 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
VPS52-218ENST00000482399 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
VPS52-218ENST00000482399 LGR6Q9HBX8 967 aa15.06■□□□□ 0
VPS52-218ENST00000482399 RGS12O14924 1447 aa15.06■□□□□ 0
VPS52-218ENST00000482399 PDCP20941 246 aa15.05■□□□□ 0
VPS52-218ENST00000482399 PSMA5P28066 241 aa15.05■□□□□ 0
VPS52-218ENST00000482399 LARP1Q6PKG0 1096 aaKnown RBP15.05■□□□□ 0
VPS52-218ENST00000482399 SDF4Q9BRK5 362 aa15.05■□□□□ 0
VPS52-218ENST00000482399 MAP3K2Q9Y2U5 619 aa15.05■□□□□ 0
VPS52-218ENST00000482399 NMIQ13287 307 aaPredicted RBP15.05■□□□□ -0
VPS52-218ENST00000482399 NEUROD6Q96NK8 337 aa15.05■□□□□ -0
VPS52-218ENST00000482399 PTPRMP28827 1452 aa15.05■□□□□ -0
VPS52-218ENST00000482399 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
VPS52-218ENST00000482399 ERICH4A6NGS2 130 aa15.05■□□□□ -0
VPS52-218ENST00000482399 CCT2P78371 535 aaKnown RBP15.05■□□□□ -0
VPS52-218ENST00000482399 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
VPS52-218ENST00000482399 LSG1Q9H089 658 aaKnown RBP15.05■□□□□ -0
VPS52-218ENST00000482399 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ -0
VPS52-218ENST00000482399 SMAP1Q8IYB5 467 aaPredicted RBP15.04■□□□□ -0
VPS52-218ENST00000482399 TPCN1Q9ULQ1 816 aa15.04■□□□□ -0
VPS52-218ENST00000482399 KIAA0232Q92628 1395 aa15.04■□□□□ -0
VPS52-218ENST00000482399 JAK2O60674 1132 aa15.04■□□□□ -0
VPS52-218ENST00000482399 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
VPS52-218ENST00000482399 CREB3L3Q68CJ9 461 aa15.04■□□□□ -0
VPS52-218ENST00000482399 HYPKQ9NX55 129 aa15.04■□□□□ -0
VPS52-218ENST00000482399 EID1Q9Y6B2 187 aa15.04■□□□□ -0
VPS52-218ENST00000482399 ME1P48163 572 aa15.04■□□□□ -0
VPS52-218ENST00000482399 ISM2Q6H9L7 571 aa15.04■□□□□ -0
VPS52-218ENST00000482399 STK11IPQ8N1F8 1099 aa15.04■□□□□ -0
VPS52-218ENST00000482399 AP5Z1O43299 807 aa15.03■□□□□ -0
VPS52-218ENST00000482399 CCDC73Q6ZRK6 1079 aa15.03■□□□□ -0
VPS52-218ENST00000482399 RAB11FIP4Q86YS3 637 aa15.03■□□□□ -0
VPS52-218ENST00000482399 CBX8Q9HC52 389 aa15.03■□□□□ -0
VPS52-218ENST00000482399 SH2B1Q9NRF2 756 aaPredicted RBP15.03■□□□□ -0
VPS52-218ENST00000482399 CGNQ9P2M7 1197 aaKnown RBP15.03■□□□□ -0
VPS52-218ENST00000482399 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
VPS52-218ENST00000482399 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
VPS52-218ENST00000482399 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
VPS52-218ENST00000482399 ZNF710Q8N1W2 664 aa15.03■□□□□ -0
VPS52-218ENST00000482399 VWDEQ8N2E2 1590 aa15.03■□□□□ -0
VPS52-218ENST00000482399 HOMER1Q86YM7 354 aa15.02■□□□□ -0
VPS52-218ENST00000482399 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
VPS52-218ENST00000482399 SSH3Q8TE77 659 aa15.02■□□□□ -0
VPS52-218ENST00000482399 SMC2O95347 1197 aa15.02■□□□□ -0
VPS52-218ENST00000482399 TPM3P06753 285 aa15.02■□□□□ -0
VPS52-218ENST00000482399 PI4K2BQ8TCG2 481 aa15.02■□□□□ -0
VPS52-218ENST00000482399 LRRC59Q96AG4 307 aaKnown RBP15.02■□□□□ -0
VPS52-218ENST00000482399 TRERF1Q96PN7 1200 aa15.02■□□□□ -0
VPS52-218ENST00000482399 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
VPS52-218ENST00000482399 BIN1O00499 593 aa15.02□□□□□ -0.01
VPS52-218ENST00000482399 CHST3Q7LGC8 479 aa15.02□□□□□ -0.01
VPS52-218ENST00000482399 KIAA1524Q8TCG1 905 aa15.02□□□□□ -0.01
VPS52-218ENST00000482399 STAP2Q9UGK3 403 aa15.02□□□□□ -0.01
VPS52-218ENST00000482399 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
VPS52-218ENST00000482399 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 NR1I2O75469 434 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 CDK11BP21127 795 aaKnown RBP15.01□□□□□ -0.01
VPS52-218ENST00000482399 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 BRF1Q92994 677 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 SCAND2PQ9GZW5 306 aaPredicted RBP15.01□□□□□ -0.01
VPS52-218ENST00000482399 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 DEPDC5O75140 1603 aa15.01□□□□□ -0.01
VPS52-218ENST00000482399 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
VPS52-218ENST00000482399 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
VPS52-218ENST00000482399 ARID5BQ14865 1188 aa15□□□□□ -0.01
VPS52-218ENST00000482399 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms