RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PDIA6Q15084 440 aa19.48■□□□□ 0.71
RXRA-202ENST00000481739 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
RXRA-202ENST00000481739 LRRFIP2Q9Y608 721 aaKnown RBP19.48■□□□□ 0.71
RXRA-202ENST00000481739 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
RXRA-202ENST00000481739 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
RXRA-202ENST00000481739 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
RXRA-202ENST00000481739 RBM25P49756 843 aaKnown RBP19.46■□□□□ 0.71
RXRA-202ENST00000481739 DNAJC10Q8IXB1 793 aa19.46■□□□□ 0.71
RXRA-202ENST00000481739 LRRCC1Q9C099 1032 aa19.46■□□□□ 0.71
RXRA-202ENST00000481739 RAB11FIP3O75154 756 aa19.46■□□□□ 0.71
RXRA-202ENST00000481739 A1BGP04217 495 aa19.45■□□□□ 0.7
RXRA-202ENST00000481739 XAGE3Q8WTP9 111 aa19.45■□□□□ 0.7
RXRA-202ENST00000481739 PNMA6EA0A0J9YXQ4 647 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 STARD3NLO95772 234 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 GSPT1P15170 499 aaKnown RBP19.44■□□□□ 0.7
RXRA-202ENST00000481739 POLA2Q14181 598 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 HSP90AB4PQ58FF6 505 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 CASC1Q6TDU7 716 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 TBC1D9Q6ZT07 1266 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 COPS6Q7L5N1 327 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 LINS1Q8NG48 757 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 RBM6P78332 1123 aaKnown RBP19.44■□□□□ 0.7
RXRA-202ENST00000481739 MTX1Q13505 466 aa19.44■□□□□ 0.7
RXRA-202ENST00000481739 SMARCC1Q92922 1105 aaPredicted RBP19.44■□□□□ 0.7
RXRA-202ENST00000481739 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 NBPF14Q5TI25 921 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
RXRA-202ENST00000481739 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 AOX1Q06278 1338 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 PALLDQ8WX93 1383 aa19.42■□□□□ 0.7
RXRA-202ENST00000481739 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
RXRA-202ENST00000481739 UTYO14607 1347 aa19.41■□□□□ 0.7
RXRA-202ENST00000481739 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
RXRA-202ENST00000481739 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
RXRA-202ENST00000481739 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
RXRA-202ENST00000481739 PDE1AP54750 535 aa19.4■□□□□ 0.7
RXRA-202ENST00000481739 NEXNQ0ZGT2 675 aa19.4■□□□□ 0.7
RXRA-202ENST00000481739 KRT27Q7Z3Y8 459 aa19.4■□□□□ 0.7
RXRA-202ENST00000481739 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
RXRA-202ENST00000481739 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
RXRA-202ENST00000481739 C9orf78Q9NZ63 289 aaPredicted RBP19.4■□□□□ 0.7
RXRA-202ENST00000481739 BRWD3Q6RI45 1802 aa19.4■□□□□ 0.7
RXRA-202ENST00000481739 SALL3Q9BXA9 1300 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 LOC102724428A0A0B4J2F2 783 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.7
RXRA-202ENST00000481739 SIK1P57059 783 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 PTF1AQ7RTS3 328 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 LRP10Q7Z4F1 713 aa19.39■□□□□ 0.7
RXRA-202ENST00000481739 APBB1O00213 710 aa19.39■□□□□ 0.69
RXRA-202ENST00000481739 CYP19A1P11511 503 aaPredicted RBP19.39■□□□□ 0.69
RXRA-202ENST00000481739 STAP2Q9UGK3 403 aa19.39■□□□□ 0.69
RXRA-202ENST00000481739 NHSQ6T4R5 1651 aa19.38■□□□□ 0.69
RXRA-202ENST00000481739 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
RXRA-202ENST00000481739 RXRBP28702 533 aa19.38■□□□□ 0.69
RXRA-202ENST00000481739 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
RXRA-202ENST00000481739 TJP1Q07157 1748 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 GRM8O00222 908 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 MX1P20591 662 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 SLC4A3P48751 1232 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 RTL5Q5HYW3 569 aaPredicted RBP19.37■□□□□ 0.69
RXRA-202ENST00000481739 OTUD7AQ8TE49 926 aaPredicted RBP19.37■□□□□ 0.69
RXRA-202ENST00000481739 BTAF1O14981 1849 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 SDSP20132 328 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 ARXQ96QS3 562 aa19.37■□□□□ 0.69
RXRA-202ENST00000481739 TTLL7Q6ZT98 887 aa19.36■□□□□ 0.69
RXRA-202ENST00000481739 TBC1D2Q9BYX2 928 aa19.36■□□□□ 0.69
RXRA-202ENST00000481739 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
RXRA-202ENST00000481739 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
RXRA-202ENST00000481739 ERC1Q8IUD2 1116 aa19.35■□□□□ 0.69
RXRA-202ENST00000481739 PLBD2Q8NHP8 589 aa19.35■□□□□ 0.69
RXRA-202ENST00000481739 SNX21Q969T3 373 aa19.35■□□□□ 0.69
RXRA-202ENST00000481739 MYD88Q99836 296 aa19.35■□□□□ 0.69
RXRA-202ENST00000481739 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
RXRA-202ENST00000481739 REC8O95072 547 aa19.34■□□□□ 0.69
RXRA-202ENST00000481739 ITPK1Q13572 414 aa19.34■□□□□ 0.69
RXRA-202ENST00000481739 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
RXRA-202ENST00000481739 RHPN1Q8TCX5 695 aa19.34■□□□□ 0.69
RXRA-202ENST00000481739 ZBTB1Q9Y2K1 713 aa19.34■□□□□ 0.69
RXRA-202ENST00000481739 COL15A1P39059 1388 aa19.34■□□□□ 0.69
RXRA-202ENST00000481739 HSCBQ8IWL3 235 aa19.33■□□□□ 0.69
RXRA-202ENST00000481739 ZBTB3Q9H5J0 574 aa19.33■□□□□ 0.69
RXRA-202ENST00000481739 ARFGEF2Q9Y6D5 1785 aa19.33■□□□□ 0.69
RXRA-202ENST00000481739 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
RXRA-202ENST00000481739 NEURL1BA8MQ27 555 aa19.32■□□□□ 0.68
RXRA-202ENST00000481739 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
RXRA-202ENST00000481739 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
RXRA-202ENST00000481739 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
RXRA-202ENST00000481739 RGS17Q9UGC6 210 aaPredicted RBP19.32■□□□□ 0.68
RXRA-202ENST00000481739 KCNQ4P56696 695 aa19.31■□□□□ 0.68
RXRA-202ENST00000481739 NBR1Q14596 966 aa19.31■□□□□ 0.68
RXRA-202ENST00000481739 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
RXRA-202ENST00000481739 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
RXRA-202ENST00000481739 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
RXRA-202ENST00000481739 GCKRQ14397 625 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms