RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 LINS1Q8NG48 757 aa13.96□□□□□ -0.17
RAPGEF3-209ENST00000479866 FAM13BQ9NYF5 915 aa13.96□□□□□ -0.17
RAPGEF3-209ENST00000479866 PIK3C2AO00443 1686 aa13.96□□□□□ -0.18
RAPGEF3-209ENST00000479866 CDC45O75419 566 aa13.96□□□□□ -0.18
RAPGEF3-209ENST00000479866 SIRT2Q8IXJ6 389 aa13.96□□□□□ -0.18
RAPGEF3-209ENST00000479866 HOXB7P09629 217 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 DCTPP1Q9H773 170 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 PIGBQ92521 554 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
RAPGEF3-209ENST00000479866 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
RAPGEF3-209ENST00000479866 DNAJC2Q99543 621 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-209ENST00000479866 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
RAPGEF3-209ENST00000479866 MX1P20591 662 aa13.94□□□□□ -0.18
RAPGEF3-209ENST00000479866 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-209ENST00000479866 PHF14O94880 888 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 CCDC57Q2TAC2 916 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 LMBR1LQ6UX01 489 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 KIF1BPQ96EK5 621 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 CWC25Q9NXE8 425 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 PXDNQ92626 1479 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 MCCP23508 829 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 TRIM44Q96DX7 344 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 AKAP12Q02952 1782 aa13.93□□□□□ -0.18
RAPGEF3-209ENST00000479866 IRX3P78415 501 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 FAM89AQ96GI7 184 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 MEGF6O75095 1541 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 ANKRD26Q9UPS8 1709 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 SUCLG2Q96I99 432 aa13.92□□□□□ -0.18
RAPGEF3-209ENST00000479866 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 CNNM1Q9NRU3 951 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 PTMSP20962 102 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 PEAK1Q9H792 1746 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 NRKQ7Z2Y5 1582 aa13.91□□□□□ -0.18
RAPGEF3-209ENST00000479866 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-209ENST00000479866 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-209ENST00000479866 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-209ENST00000479866 ERC2O15083 957 aa13.9□□□□□ -0.18
RAPGEF3-209ENST00000479866 FSD1Q9BTV5 496 aa13.9□□□□□ -0.18
RAPGEF3-209ENST00000479866 KCNQ2O43526 872 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 REC8O95072 547 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 HSPA1LP34931 641 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 GCKRQ14397 625 aa13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 CWC27Q6UX04 472 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-209ENST00000479866 PDE1AP54750 535 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 ERC1Q8IUD2 1116 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 SDSP20132 328 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 FAM193AP78312 1265 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
RAPGEF3-209ENST00000479866 CCDC24Q8N4L8 307 aa13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 TTC22Q5TAA0 569 aa13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 CPDO75976 1380 aa13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 ZNF594Q96JF6 807 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF3-209ENST00000479866 FOXD4L5Q5VV16 416 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 FOXD4L4Q8WXT5 416 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 CDCA7Q9BWT1 371 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 RAB11FIP3O75154 756 aa13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 FKBP4Q02790 459 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
RAPGEF3-209ENST00000479866 IFIT5Q13325 482 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-209ENST00000479866 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
RAPGEF3-209ENST00000479866 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAPGEF3-209ENST00000479866 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
RAPGEF3-209ENST00000479866 LOC102724428A0A0B4J2F2 783 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 ZPR1O75312 459 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 SIK1P57059 783 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NFAT5O94916 1531 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 METTL24Q5JXM2 366 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 IGKV5-2P06315 115 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms