RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SRGAP3O43295 1099 aa17.91■□□□□ 0.46
CLDN18-203ENST00000479660 SMARCA5O60264 1052 aaPredicted RBP17.91■□□□□ 0.46
CLDN18-203ENST00000479660 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
CLDN18-203ENST00000479660 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
CLDN18-203ENST00000479660 UTYO14607 1347 aa17.9■□□□□ 0.46
CLDN18-203ENST00000479660 TTLL7Q6ZT98 887 aa17.9■□□□□ 0.46
CLDN18-203ENST00000479660 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
CLDN18-203ENST00000479660 POLA2Q14181 598 aa17.89■□□□□ 0.46
CLDN18-203ENST00000479660 GCKRQ14397 625 aa17.89■□□□□ 0.46
CLDN18-203ENST00000479660 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.45
CLDN18-203ENST00000479660 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
CLDN18-203ENST00000479660 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
CLDN18-203ENST00000479660 BMP2KLQ5H9B9 411 aa17.88■□□□□ 0.45
CLDN18-203ENST00000479660 SLC4A9Q96Q91 983 aa17.88■□□□□ 0.45
CLDN18-203ENST00000479660 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
CLDN18-203ENST00000479660 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
CLDN18-203ENST00000479660 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
CLDN18-203ENST00000479660 MTX1Q13505 466 aa17.87■□□□□ 0.45
CLDN18-203ENST00000479660 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
CLDN18-203ENST00000479660 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
CLDN18-203ENST00000479660 SEC24BO95487 1268 aa17.86■□□□□ 0.45
CLDN18-203ENST00000479660 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
CLDN18-203ENST00000479660 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
CLDN18-203ENST00000479660 ZBTB3Q9H5J0 574 aa17.86■□□□□ 0.45
CLDN18-203ENST00000479660 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
CLDN18-203ENST00000479660 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
CLDN18-203ENST00000479660 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
CLDN18-203ENST00000479660 RAB11FIP3O75154 756 aa17.84■□□□□ 0.45
CLDN18-203ENST00000479660 A0A087WZG4 1122 aa17.83■□□□□ 0.45
CLDN18-203ENST00000479660 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.83■□□□□ 0.44
CLDN18-203ENST00000479660 KCNQ2O43526 872 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 HSP90AB4PQ58FF6 505 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 UBE3BQ7Z3V4 1068 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
CLDN18-203ENST00000479660 AFF2P51816 1311 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 TTC22Q5TAA0 569 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
CLDN18-203ENST00000479660 ARXQ96QS3 562 aa17.82■□□□□ 0.44
CLDN18-203ENST00000479660 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
CLDN18-203ENST00000479660 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
CLDN18-203ENST00000479660 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
CLDN18-203ENST00000479660 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
CLDN18-203ENST00000479660 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
CLDN18-203ENST00000479660 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
CLDN18-203ENST00000479660 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 SIK1P57059 783 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
CLDN18-203ENST00000479660 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
CLDN18-203ENST00000479660 PDE1AP54750 535 aa17.8■□□□□ 0.44
CLDN18-203ENST00000479660 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
CLDN18-203ENST00000479660 EPHA10Q5JZY3 1008 aa17.8■□□□□ 0.44
CLDN18-203ENST00000479660 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
CLDN18-203ENST00000479660 OSBPL3Q9H4L5 887 aa17.8■□□□□ 0.44
CLDN18-203ENST00000479660 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
CLDN18-203ENST00000479660 TCIRG1Q13488 830 aa17.79■□□□□ 0.44
CLDN18-203ENST00000479660 PA2G4Q9UQ80 394 aaKnown RBP17.79■□□□□ 0.44
CLDN18-203ENST00000479660 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
CLDN18-203ENST00000479660 H7C1W4 665 aa17.79■□□□□ 0.44
CLDN18-203ENST00000479660 CASP7P55210 303 aa17.79■□□□□ 0.44
CLDN18-203ENST00000479660 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
CLDN18-203ENST00000479660 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
CLDN18-203ENST00000479660 TRPC5Q9UL62 973 aaPredicted RBP17.78■□□□□ 0.44
CLDN18-203ENST00000479660 COL15A1P39059 1388 aa17.78■□□□□ 0.44
CLDN18-203ENST00000479660 TJP1Q07157 1748 aa17.78■□□□□ 0.44
CLDN18-203ENST00000479660 SALL3Q9BXA9 1300 aa17.78■□□□□ 0.44
CLDN18-203ENST00000479660 MX1P20591 662 aa17.77■□□□□ 0.44
CLDN18-203ENST00000479660 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
CLDN18-203ENST00000479660 MSH5O43196 834 aa17.77■□□□□ 0.43
CLDN18-203ENST00000479660 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.43
CLDN18-203ENST00000479660 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
CLDN18-203ENST00000479660 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
CLDN18-203ENST00000479660 G3BP1Q13283 466 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 ITPK1Q13572 414 aa17.76■□□□□ 0.43
CLDN18-203ENST00000479660 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
CLDN18-203ENST00000479660 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
CLDN18-203ENST00000479660 CCDC87Q9NVE4 849 aa17.76■□□□□ 0.43
CLDN18-203ENST00000479660 CDC45O75419 566 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 SDSP20132 328 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
CLDN18-203ENST00000479660 HLFQ16534 295 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 TSHZ3Q63HK5 1081 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 ATRNO75882 1429 aa17.75■□□□□ 0.43
CLDN18-203ENST00000479660 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
CLDN18-203ENST00000479660 HSP90AB3PQ58FF7 597 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
CLDN18-203ENST00000479660 DDRGK1Q96HY6 314 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
CLDN18-203ENST00000479660 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 CLASRPQ8N2M8 674 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms