RNA–Protein interactions for RNA: ENST00000479480.5

CTPS1-208, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 777 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-208ENST00000479480 KCNQ3O43525 872 aa11.44□□□□□ -0.58
CTPS1-208ENST00000479480 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
CTPS1-208ENST00000479480 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTPS1-208ENST00000479480 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
CTPS1-208ENST00000479480 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
CTPS1-208ENST00000479480 C21orf2O43822 256 aa11.43□□□□□ -0.58
CTPS1-208ENST00000479480 A1BGP04217 495 aa11.43□□□□□ -0.58
CTPS1-208ENST00000479480 ARFGEF1Q9Y6D6 1849 aa11.43□□□□□ -0.58
CTPS1-208ENST00000479480 STARD3NLO95772 234 aa11.42□□□□□ -0.58
CTPS1-208ENST00000479480 PRR5LQ6MZQ0 368 aa11.42□□□□□ -0.58
CTPS1-208ENST00000479480 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
CTPS1-208ENST00000479480 WDR90Q96KV7 1748 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 A0A087WZG4 1122 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 ZNF790Q6PG37 636 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 TTC5Q8N0Z6 440 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 BRIP1Q9BX63 1249 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
CTPS1-208ENST00000479480 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
CTPS1-208ENST00000479480 MRC1P22897 1456 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
CTPS1-208ENST00000479480 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
CTPS1-208ENST00000479480 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
CTPS1-208ENST00000479480 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 PHACTR3Q96KR7 559 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 USP16Q9Y5T5 823 aa11.4□□□□□ -0.58
CTPS1-208ENST00000479480 SBF1O95248 1867 aa11.4□□□□□ -0.59
CTPS1-208ENST00000479480 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.59
CTPS1-208ENST00000479480 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 PYGBP11216 843 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 PDE6BP35913 854 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 TEFQ10587 303 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
CTPS1-208ENST00000479480 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 TEX13AQ9BXU3 409 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-208ENST00000479480 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
CTPS1-208ENST00000479480 AFDNP55196 1824 aaKnown RBP11.38□□□□□ -0.59
CTPS1-208ENST00000479480 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
CTPS1-208ENST00000479480 SRGNP10124 158 aa11.37□□□□□ -0.59
CTPS1-208ENST00000479480 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
CTPS1-208ENST00000479480 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
CTPS1-208ENST00000479480 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
CTPS1-208ENST00000479480 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
CTPS1-208ENST00000479480 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
CTPS1-208ENST00000479480 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
CTPS1-208ENST00000479480 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
CTPS1-208ENST00000479480 C7orf43Q8WVR3 580 aa11.36□□□□□ -0.59
CTPS1-208ENST00000479480 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
CTPS1-208ENST00000479480 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
CTPS1-208ENST00000479480 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 CNBD1Q8NA66 436 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 MASTLQ96GX5 879 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-208ENST00000479480 TAOK3Q9H2K8 898 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
CTPS1-208ENST00000479480 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-208ENST00000479480 CEMIPQ8WUJ3 1361 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 DCTN1Q14203 1278 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
CTPS1-208ENST00000479480 NBPF15Q8N660 670 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 PCNTO95613 3336 aa11.34□□□□□ -0.59
CTPS1-208ENST00000479480 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
CTPS1-208ENST00000479480 FAM177BA6PVY3 158 aa11.33□□□□□ -0.6
CTPS1-208ENST00000479480 NPHP1O15259 732 aa11.33□□□□□ -0.6
CTPS1-208ENST00000479480 ST5P78524 1137 aa11.33□□□□□ -0.6
CTPS1-208ENST00000479480 MCM10Q7L590 875 aa11.33□□□□□ -0.6
CTPS1-208ENST00000479480 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-208ENST00000479480 HLFQ16534 295 aa11.32□□□□□ -0.6
CTPS1-208ENST00000479480 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
CTPS1-208ENST00000479480 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-208ENST00000479480 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-208ENST00000479480 ZNF277Q9NRM2 450 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-208ENST00000479480 MIS18AQ9NYP9 233 aa11.32□□□□□ -0.6
CTPS1-208ENST00000479480 ANKRD31Q8N7Z5 1873 aa11.32□□□□□ -0.6
CTPS1-208ENST00000479480 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-208ENST00000479480 SNRPA1P09661 255 aaKnown RBP11.31□□□□□ -0.6
CTPS1-208ENST00000479480 NPR1P16066 1061 aa11.31□□□□□ -0.6
CTPS1-208ENST00000479480 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
CTPS1-208ENST00000479480 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
CTPS1-208ENST00000479480 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
CTPS1-208ENST00000479480 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
CTPS1-208ENST00000479480 NPC1L1Q9UHC9 1359 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 FOXN1O15353 648 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 CCDC93Q567U6 631 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
CTPS1-208ENST00000479480 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
CTPS1-208ENST00000479480 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms