RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 NPM2Q86SE8 214 aaKnown RBP25.42■■□□□ 1.66
ITGA4-207ENST00000476089 SRGAP3O43295 1099 aa25.41■■□□□ 1.66
ITGA4-207ENST00000476089 EXOC6BQ9Y2D4 811 aa25.41■■□□□ 1.66
ITGA4-207ENST00000476089 ARFGEF2Q9Y6D5 1785 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 GCKRQ14397 625 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 BCL11AQ9H165 835 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.4■■□□□ 1.66
ITGA4-207ENST00000476089 MYT1Q01538 1121 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 POLA2Q14181 598 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 ACSBG1Q96GR2 724 aa25.4■■□□□ 1.66
ITGA4-207ENST00000476089 LRRCC1Q9C099 1032 aa25.39■■□□□ 1.65
ITGA4-207ENST00000476089 SMARCA5O60264 1052 aaPredicted RBP25.38■■□□□ 1.65
ITGA4-207ENST00000476089 BMP2KLQ5H9B9 411 aa25.38■■□□□ 1.65
ITGA4-207ENST00000476089 MTX1Q13505 466 aa25.37■■□□□ 1.65
ITGA4-207ENST00000476089 TTLL7Q6ZT98 887 aa25.37■■□□□ 1.65
ITGA4-207ENST00000476089 PLEKHM2Q8IWE5 1019 aa25.37■■□□□ 1.65
ITGA4-207ENST00000476089 RAB11FIP3O75154 756 aa25.36■■□□□ 1.65
ITGA4-207ENST00000476089 HSP90AB4PQ58FF6 505 aa25.36■■□□□ 1.65
ITGA4-207ENST00000476089 AFDNP55196 1824 aaKnown RBP25.36■■□□□ 1.65
ITGA4-207ENST00000476089 SURF6O75683 361 aaKnown RBP25.35■■□□□ 1.65
ITGA4-207ENST00000476089 SUCLG2Q96I99 432 aa25.35■■□□□ 1.65
ITGA4-207ENST00000476089 ZNF330Q9Y3S2 320 aaPredicted RBP25.35■■□□□ 1.65
ITGA4-207ENST00000476089 C16orf71Q8IYS4 520 aaPredicted RBP25.35■■□□□ 1.65
ITGA4-207ENST00000476089 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
ITGA4-207ENST00000476089 KIF6Q6ZMV9 814 aa25.34■■□□□ 1.65
ITGA4-207ENST00000476089 ZBTB3Q9H5J0 574 aa25.34■■□□□ 1.65
ITGA4-207ENST00000476089 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
ITGA4-207ENST00000476089 CYP19A1P11511 503 aaPredicted RBP25.33■■□□□ 1.65
ITGA4-207ENST00000476089 SLC4A9Q96Q91 983 aa25.33■■□□□ 1.65
ITGA4-207ENST00000476089 SMARCC1Q92922 1105 aaPredicted RBP25.32■■□□□ 1.64
ITGA4-207ENST00000476089 BICC1Q9H694 974 aaKnown RBP25.32■■□□□ 1.64
ITGA4-207ENST00000476089 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
ITGA4-207ENST00000476089 AFF2P51816 1311 aa25.32■■□□□ 1.64
ITGA4-207ENST00000476089 A0A087WZG4 1122 aa25.31■■□□□ 1.64
ITGA4-207ENST00000476089 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
ITGA4-207ENST00000476089 GJD4Q96KN9 370 aaPredicted RBP25.3■■□□□ 1.64
ITGA4-207ENST00000476089 SEC24BO95487 1268 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 OS9Q13438 667 aaPredicted RBP25.29■■□□□ 1.64
ITGA4-207ENST00000476089 TTC22Q5TAA0 569 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 UBE3BQ7Z3V4 1068 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 CCDC191Q8NCU4 936 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 OTUD7AQ8TE49 926 aaPredicted RBP25.29■■□□□ 1.64
ITGA4-207ENST00000476089 KIF1BPQ96EK5 621 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 KAZALD1Q96I82 304 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 ARXQ96QS3 562 aa25.29■■□□□ 1.64
ITGA4-207ENST00000476089 NOP58Q9Y2X3 529 aaKnown RBP25.28■■□□□ 1.64
ITGA4-207ENST00000476089 TJP1Q07157 1748 aa25.28■■□□□ 1.64
ITGA4-207ENST00000476089 ATP6V1AP38606 617 aa25.28■■□□□ 1.64
ITGA4-207ENST00000476089 IPO9Q96P70 1041 aaKnown RBP25.28■■□□□ 1.64
ITGA4-207ENST00000476089 LOC102724428A0A0B4J2F2 783 aa25.27■■□□□ 1.64
ITGA4-207ENST00000476089 SIK1P57059 783 aa25.27■■□□□ 1.64
ITGA4-207ENST00000476089 RHPN1Q8TCX5 695 aa25.27■■□□□ 1.64
ITGA4-207ENST00000476089 TRPC5Q9UL62 973 aaPredicted RBP25.27■■□□□ 1.64
ITGA4-207ENST00000476089 COL15A1P39059 1388 aa25.27■■□□□ 1.64
ITGA4-207ENST00000476089 PALLDQ8WX93 1383 aa25.27■■□□□ 1.64
ITGA4-207ENST00000476089 KCNQ2O43526 872 aa25.26■■□□□ 1.63
ITGA4-207ENST00000476089 TCIRG1Q13488 830 aa25.26■■□□□ 1.63
ITGA4-207ENST00000476089 ERC1Q8IUD2 1116 aa25.26■■□□□ 1.63
ITGA4-207ENST00000476089 OSBPL3Q9H4L5 887 aa25.26■■□□□ 1.63
ITGA4-207ENST00000476089 ZBTB1Q9Y2K1 713 aa25.26■■□□□ 1.63
ITGA4-207ENST00000476089 THSD7AQ9UPZ6 1657 aa25.25■■□□□ 1.63
ITGA4-207ENST00000476089 MAP3K15Q6ZN16 1313 aa25.25■■□□□ 1.63
ITGA4-207ENST00000476089 H7C1W4 665 aa25.25■■□□□ 1.63
ITGA4-207ENST00000476089 IL6STP40189 918 aaPredicted RBP25.25■■□□□ 1.63
ITGA4-207ENST00000476089 PDE1AP54750 535 aa25.25■■□□□ 1.63
ITGA4-207ENST00000476089 GSPT1P15170 499 aaKnown RBP25.24■■□□□ 1.63
ITGA4-207ENST00000476089 JARID2Q92833 1246 aaPredicted RBP25.24■■□□□ 1.63
ITGA4-207ENST00000476089 DDRGK1Q96HY6 314 aa25.24■■□□□ 1.63
ITGA4-207ENST00000476089 MX1P20591 662 aa25.23■■□□□ 1.63
ITGA4-207ENST00000476089 IL1RAPL2Q9NP60 686 aa25.23■■□□□ 1.63
ITGA4-207ENST00000476089 HSP90AB3PQ58FF7 597 aa25.23■■□□□ 1.63
ITGA4-207ENST00000476089 ISCA1Q9BUE6 129 aa25.23■■□□□ 1.63
ITGA4-207ENST00000476089 CCDC87Q9NVE4 849 aa25.23■■□□□ 1.63
ITGA4-207ENST00000476089 ATRNO75882 1429 aa25.22■■□□□ 1.63
ITGA4-207ENST00000476089 CDC45O75419 566 aa25.22■■□□□ 1.63
ITGA4-207ENST00000476089 CASP7P55210 303 aa25.22■■□□□ 1.63
ITGA4-207ENST00000476089 G3BP1Q13283 466 aaKnown RBP eCLIP25.22■■□□□ 1.63
ITGA4-207ENST00000476089 GIGYF2Q6Y7W6 1299 aaKnown RBP25.22■■□□□ 1.63
ITGA4-207ENST00000476089 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
ITGA4-207ENST00000476089 TRIM28Q13263 835 aaKnown RBP25.21■■□□□ 1.63
ITGA4-207ENST00000476089 EPHA10Q5JZY3 1008 aa25.21■■□□□ 1.63
ITGA4-207ENST00000476089 PA2G4Q9UQ80 394 aaKnown RBP25.21■■□□□ 1.63
ITGA4-207ENST00000476089 SALL3Q9BXA9 1300 aa25.21■■□□□ 1.63
ITGA4-207ENST00000476089 MFAP1P55081 439 aaKnown RBP25.21■■□□□ 1.63
ITGA4-207ENST00000476089 RABL6Q3YEC7 729 aaPredicted RBP25.21■■□□□ 1.63
ITGA4-207ENST00000476089 CRKLP46109 303 aaKnown RBP25.2■■□□□ 1.62
ITGA4-207ENST00000476089 DZIP3Q86Y13 1208 aaKnown RBP25.19■■□□□ 1.62
ITGA4-207ENST00000476089 CLASRPQ8N2M8 674 aaKnown RBP25.19■■□□□ 1.62
ITGA4-207ENST00000476089 STAP2Q9UGK3 403 aa25.19■■□□□ 1.62
ITGA4-207ENST00000476089 CICQ96RK0 1608 aaPredicted RBP25.19■■□□□ 1.62
ITGA4-207ENST00000476089 ERVV-1B6SEH8 477 aa25.19■■□□□ 1.62
ITGA4-207ENST00000476089 ONECUT3O60422 494 aaPredicted RBP25.19■■□□□ 1.62
ITGA4-207ENST00000476089 AOX1Q06278 1338 aa25.18■■□□□ 1.62
ITGA4-207ENST00000476089 ITPK1Q13572 414 aa25.18■■□□□ 1.62
ITGA4-207ENST00000476089 INTS5Q6P9B9 1019 aaKnown RBP25.18■■□□□ 1.62
ITGA4-207ENST00000476089 CASC1Q6TDU7 716 aa25.18■■□□□ 1.62
ITGA4-207ENST00000476089 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
ITGA4-207ENST00000476089 SDSP20132 328 aa25.17■■□□□ 1.62
ITGA4-207ENST00000476089 EIF5P55010 431 aaKnown RBP25.17■■□□□ 1.62
ITGA4-207ENST00000476089 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms