RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 UQCRHLA0A096LP55 91 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 CBFA2T2O43439 604 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 UQCRHP07919 91 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 LMNB1P20700 586 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF132P52740 706 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 RPUSD2Q8IZ73 545 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 FNBP4Q8N3X1 1017 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 IQGAP3Q86VI3 1631 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 MAGI2Q86UL8 1455 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 ANP32CO43423 234 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 MS4A1P11836 297 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 IMPDH2P12268 514 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 ZBED6P86452 979 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 SHROOM1Q2M3G4 852 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 SKAP1Q86WV1 359 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 STAG1Q8WVM7 1258 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 PLEKHG4BQ96PX9 1271 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 FAM135AQ9P2D6 1515 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 EIF3JO75822 258 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 TTC19Q6DKK2 380 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 SAPCD2Q86UD0 394 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 DRAXINQ8NBI3 349 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 PAIP2Q9BPZ3 127 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 RWDD1Q9H446 243 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 CHCHD3Q9NX63 227 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 ERBINQ96RT1 1412 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 FGAP02671 866 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 CLK1P49759 484 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 KRT77Q7Z794 578 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 RBM12BQ8IXT5 1001 aaKnown RBP5.87□□□□□ -1.47
NPHP3-206ENST00000474871 FRS2Q8WU20 508 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 CFAP74Q9C0B2 1584 aa5.87□□□□□ -1.47
NPHP3-206ENST00000474871 RNF123Q5XPI4 1314 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 FANCAO15360 1455 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 ATP2B1P20020 1258 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 MNS1Q8NEH6 495 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 ANKRD7Q92527 254 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC102AQ96A19 550 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 PANK3Q9H999 370 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 RABL2BQ9UNT1 228 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 C21orf2O43822 256 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 SH3BP5O60239 455 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 TNNT2P45379 298 aaPredicted RBP5.86□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM151BQ8IW70 566 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 HS6ST3Q8IZP7 471 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 SCYL1Q96KG9 808 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 UTP6Q9NYH9 597 aaKnown RBP5.86□□□□□ -1.47
NPHP3-206ENST00000474871 TRAPPC8Q9Y2L5 1435 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 KIF3AQ9Y496 699 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 KCNA2P16389 499 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 TERF2Q15554 542 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 TDRD7Q8NHU6 1098 aaKnown RBP5.86□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC26Q8TAB7 109 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 MMEP08473 750 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
NPHP3-206ENST00000474871 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
NPHP3-206ENST00000474871 EGFLAMQ63HQ2 1017 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 PACS1Q6VY07 963 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 DRC1Q96MC2 740 aa5.86□□□□□ -1.47
NPHP3-206ENST00000474871 DEPDC5O75140 1603 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 TRIM64CA6NLI5 447 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 MAGEA10P43363 369 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 POU5F1Q01860 360 aaKnown RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 PPP2R5AQ15172 486 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 PPP1R9BQ96SB3 815 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 COG6Q9Y2V7 657 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 RTEL1-TNFRSF6BF6WH68 1400 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 EME2A4GXA9 379 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 MTA2O94776 668 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 FAM69CQ0P6D2 419 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 EFCAB2Q5VUJ9 269 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 ARMC3Q5W041 872 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 NEUROD6Q96NK8 337 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 EPAS1Q99814 870 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 RSPH9Q9H1X1 276 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 TMX1Q9H3N1 280 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 TMOD4Q9NZQ9 345 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 BIN2Q9UBW5 565 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 THRAP3Q9Y2W1 955 aaKnown RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 NUP155O75694 1391 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 H7C1W4 665 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 COL19A1Q14993 1142 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 SUGP1Q8IWZ8 645 aaKnown RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 NLGN1Q8N2Q7 840 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 C8orf37Q96NL8 207 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 RBSNQ9H1K0 784 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 SUDS3Q9H7L9 328 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-206ENST00000474871 IRAK4Q9NWZ3 460 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 ATP7AQ04656 1500 aa5.85□□□□□ -1.47
NPHP3-206ENST00000474871 CHL1O00533 1208 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 TNNT1P13805 278 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 NKX1-1Q15270 411 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 RPAP2Q8IXW5 612 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-206ENST00000474871 MAPK8IP1Q9UQF2 711 aa5.84□□□□□ -1.47
NPHP3-206ENST00000474871 AKAP2Q9Y2D5 859 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms