RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-208ENST00000473820 FOXN1O15353 648 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
PPP2R1A-208ENST00000473820 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 EIF5P55010 431 aaKnown RBP13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 ST5P78524 1137 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 MCM10Q7L590 875 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 CCDC146Q8IYE0 955 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
PPP2R1A-208ENST00000473820 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 TEX13AQ9BXU3 409 aaPredicted RBP13.05□□□□□ -0.32
PPP2R1A-208ENST00000473820 SCN11AQ9UI33 1791 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 NEFLP07196 543 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 VEGFBP49765 207 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 CNTNAP1P78357 1384 aa13.04□□□□□ -0.32
PPP2R1A-208ENST00000473820 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 LBX1P52954 281 aa13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 NEUROD2Q15784 382 aa13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 STYK1Q6J9G0 422 aa13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 ZBED9Q6R2W3 1325 aa13.03□□□□□ -0.32
PPP2R1A-208ENST00000473820 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
PPP2R1A-208ENST00000473820 BTBD11A6QL63 1104 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 RIPK4P57078 832 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 RRP7AQ9Y3A4 280 aaKnown RBP13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 LTBP3Q9NS15 1303 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
PPP2R1A-208ENST00000473820 SRGNP10124 158 aa13.01□□□□□ -0.33
PPP2R1A-208ENST00000473820 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
PPP2R1A-208ENST00000473820 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
PPP2R1A-208ENST00000473820 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
PPP2R1A-208ENST00000473820 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
PPP2R1A-208ENST00000473820 A1BGP04217 495 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 CCDC93Q567U6 631 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 ZNF790Q6PG37 636 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 WBP1LQ9NX94 342 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
PPP2R1A-208ENST00000473820 ABT1Q9ULW3 272 aaKnown RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
PPP2R1A-208ENST00000473820 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 KCNQ3O43525 872 aa12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 EPHX2P34913 555 aa12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
PPP2R1A-208ENST00000473820 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 BEGAINQ9BUH8 593 aa12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
PPP2R1A-208ENST00000473820 CCDC85CA6NKD9 419 aa12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 CAMTA2O94983 1202 aa12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 NPR1P16066 1061 aa12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 MAP1SQ66K74 1059 aaPredicted RBP12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
PPP2R1A-208ENST00000473820 WDR33Q9C0J8 1336 aaKnown RBP12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 APAF1O14727 1248 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 GRM1Q13255 1194 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
PPP2R1A-208ENST00000473820 SLX4Q8IY92 1834 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms