RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ADCY9O60503 1353 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 PIP4K2AP48426 406 aaPredicted RBP18.56■□□□□ 0.56
LMNA-213ENST00000473598 DNAJC10Q8IXB1 793 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
LMNA-213ENST00000473598 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
LMNA-213ENST00000473598 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
LMNA-213ENST00000473598 DNAAF4Q8WXU2 420 aa18.55■□□□□ 0.56
LMNA-213ENST00000473598 ZNF831Q5JPB2 1677 aa18.55■□□□□ 0.56
LMNA-213ENST00000473598 RGPD3A6NKT7 1758 aaPredicted RBP18.55■□□□□ 0.56
LMNA-213ENST00000473598 RGPD4Q7Z3J3 1758 aa18.55■□□□□ 0.56
LMNA-213ENST00000473598 NBPF26B4DH59 902 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 A1BGP04217 495 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 AIMP1Q12904 312 aaKnown RBP18.54■□□□□ 0.56
LMNA-213ENST00000473598 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 NBPF10Q6P3W6 841 aaKnown RBP18.54■□□□□ 0.56
LMNA-213ENST00000473598 NBPF15Q8N660 670 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
LMNA-213ENST00000473598 LY75O60449 1722 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 RREB1Q92766 1687 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 XAGE3Q8WTP9 111 aa18.54■□□□□ 0.56
LMNA-213ENST00000473598 ARFGEF2Q9Y6D5 1785 aa18.53■□□□□ 0.56
LMNA-213ENST00000473598 STARD3NLO95772 234 aa18.53■□□□□ 0.56
LMNA-213ENST00000473598 ATP10DQ9P241 1426 aa18.53■□□□□ 0.56
LMNA-213ENST00000473598 CENPQQ7L2Z9 268 aaPredicted RBP18.52■□□□□ 0.56
LMNA-213ENST00000473598 ZMYND15Q9H091 742 aa18.52■□□□□ 0.56
LMNA-213ENST00000473598 MAP3K2Q9Y2U5 619 aa18.52■□□□□ 0.56
LMNA-213ENST00000473598 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
LMNA-213ENST00000473598 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.55
LMNA-213ENST00000473598 LOC102724428A0A0B4J2F2 783 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 IGHDP01880 384 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 CYP19A1P11511 503 aaPredicted RBP18.51■□□□□ 0.55
LMNA-213ENST00000473598 SIK1P57059 783 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 GSE1Q14687 1217 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 BEND3Q5T5X7 828 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 SRCIN1Q9C0H9 1055 aa18.51■□□□□ 0.55
LMNA-213ENST00000473598 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
LMNA-213ENST00000473598 MEIS3Q99687 375 aa18.5■□□□□ 0.55
LMNA-213ENST00000473598 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
LMNA-213ENST00000473598 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
LMNA-213ENST00000473598 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
LMNA-213ENST00000473598 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
LMNA-213ENST00000473598 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
LMNA-213ENST00000473598 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
LMNA-213ENST00000473598 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
LMNA-213ENST00000473598 ITPK1Q13572 414 aa18.48■□□□□ 0.55
LMNA-213ENST00000473598 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
LMNA-213ENST00000473598 SLC27A3Q5K4L6 730 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 SRCAPQ6ZRS2 3230 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 GNAI3P08754 354 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 USP44Q9H0E7 712 aa18.47■□□□□ 0.55
LMNA-213ENST00000473598 ALDH1L1O75891 902 aa18.46■□□□□ 0.55
LMNA-213ENST00000473598 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
LMNA-213ENST00000473598 METTL22Q9BUU2 404 aaPredicted RBP18.46■□□□□ 0.55
LMNA-213ENST00000473598 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
LMNA-213ENST00000473598 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
LMNA-213ENST00000473598 TAF1LQ8IZX4 1826 aa18.45■□□□□ 0.54
LMNA-213ENST00000473598 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
LMNA-213ENST00000473598 ZNF827Q17R98 1081 aa18.45■□□□□ 0.54
LMNA-213ENST00000473598 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
LMNA-213ENST00000473598 GNAI2P04899 355 aa18.44■□□□□ 0.54
LMNA-213ENST00000473598 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
LMNA-213ENST00000473598 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
LMNA-213ENST00000473598 MYD88Q99836 296 aa18.44■□□□□ 0.54
LMNA-213ENST00000473598 IL6STP40189 918 aaPredicted RBP18.43■□□□□ 0.54
LMNA-213ENST00000473598 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
LMNA-213ENST00000473598 INTS5Q6P9B9 1019 aaKnown RBP18.43■□□□□ 0.54
LMNA-213ENST00000473598 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
LMNA-213ENST00000473598 CCDC87Q9NVE4 849 aa18.43■□□□□ 0.54
LMNA-213ENST00000473598 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
LMNA-213ENST00000473598 PSDA5PKW4 1024 aaPredicted RBP18.42■□□□□ 0.54
LMNA-213ENST00000473598 UBTFL1P0CB47 393 aaPredicted RBP18.42■□□□□ 0.54
LMNA-213ENST00000473598 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 SIRT2Q8IXJ6 389 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 ANKRD44Q8N8A2 993 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 R3HDM1Q15032 1099 aaKnown RBP18.42■□□□□ 0.54
LMNA-213ENST00000473598 CEP85Q6P2H3 762 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
LMNA-213ENST00000473598 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
LMNA-213ENST00000473598 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
LMNA-213ENST00000473598 PDE4AP27815 886 aa18.41■□□□□ 0.54
LMNA-213ENST00000473598 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
LMNA-213ENST00000473598 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
LMNA-213ENST00000473598 NUP98P52948 1817 aa18.41■□□□□ 0.54
LMNA-213ENST00000473598 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
LMNA-213ENST00000473598 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
LMNA-213ENST00000473598 BACH2Q9BYV9 841 aa18.4■□□□□ 0.54
LMNA-213ENST00000473598 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
LMNA-213ENST00000473598 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
LMNA-213ENST00000473598 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
LMNA-213ENST00000473598 SLC15A2Q16348 729 aa18.4■□□□□ 0.54
LMNA-213ENST00000473598 UTYO14607 1347 aa18.39■□□□□ 0.54
LMNA-213ENST00000473598 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
LMNA-213ENST00000473598 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
LMNA-213ENST00000473598 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
LMNA-213ENST00000473598 LRRFIP2Q9Y608 721 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms