RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
VCL-204ENST00000472585 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
VCL-204ENST00000472585 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
VCL-204ENST00000472585 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
VCL-204ENST00000472585 LDHDQ86WU2 507 aa12.69□□□□□ -0.38
VCL-204ENST00000472585 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
VCL-204ENST00000472585 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
VCL-204ENST00000472585 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
VCL-204ENST00000472585 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
VCL-204ENST00000472585 SCN4AP35499 1836 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 PASKQ96RG2 1323 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 KCNQ3O43525 872 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 PDE6BP35913 854 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 CACNA1SQ13698 1873 aa12.67□□□□□ -0.38
VCL-204ENST00000472585 A1BGP04217 495 aa12.66□□□□□ -0.38
VCL-204ENST00000472585 MAP2K1Q02750 393 aaPredicted RBP12.66□□□□□ -0.38
VCL-204ENST00000472585 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
VCL-204ENST00000472585 CLEC11AQ9Y240 323 aa12.66□□□□□ -0.38
VCL-204ENST00000472585 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 LTBP3Q9NS15 1303 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 NPHP1O15259 732 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
VCL-204ENST00000472585 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
VCL-204ENST00000472585 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
VCL-204ENST00000472585 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 BRIP1Q9BX63 1249 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
VCL-204ENST00000472585 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 STARD3NLO95772 234 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
VCL-204ENST00000472585 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 TAF1DQ9H5J8 278 aaPredicted RBP12.64□□□□□ -0.39
VCL-204ENST00000472585 HEG1Q9ULI3 1381 aa12.64□□□□□ -0.39
VCL-204ENST00000472585 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
VCL-204ENST00000472585 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
VCL-204ENST00000472585 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
VCL-204ENST00000472585 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
VCL-204ENST00000472585 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
VCL-204ENST00000472585 A0A087WZG4 1122 aa12.62□□□□□ -0.39
VCL-204ENST00000472585 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
VCL-204ENST00000472585 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
VCL-204ENST00000472585 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
VCL-204ENST00000472585 L3MBTL3Q96JM7 780 aaPredicted RBP12.62□□□□□ -0.39
VCL-204ENST00000472585 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
VCL-204ENST00000472585 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
VCL-204ENST00000472585 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
VCL-204ENST00000472585 SLX4Q8IY92 1834 aa12.62□□□□□ -0.39
VCL-204ENST00000472585 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
VCL-204ENST00000472585 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 SRGNP10124 158 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 RGS19P49795 217 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
VCL-204ENST00000472585 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
VCL-204ENST00000472585 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
VCL-204ENST00000472585 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
VCL-204ENST00000472585 EPHX2P34913 555 aa12.6□□□□□ -0.39
VCL-204ENST00000472585 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
VCL-204ENST00000472585 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
VCL-204ENST00000472585 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
VCL-204ENST00000472585 PNMA8AQ86V59 439 aaPredicted RBP12.6□□□□□ -0.39
VCL-204ENST00000472585 CNTROBQ8N137 903 aa12.6□□□□□ -0.39
VCL-204ENST00000472585 CEMIPQ8WUJ3 1361 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
VCL-204ENST00000472585 ST5P78524 1137 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 TEFQ10587 303 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
VCL-204ENST00000472585 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
VCL-204ENST00000472585 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
VCL-204ENST00000472585 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 ECE1P42892 770 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 GRM1Q13255 1194 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 CCDC93Q567U6 631 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
VCL-204ENST00000472585 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
VCL-204ENST00000472585 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 MASTLQ96GX5 879 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
VCL-204ENST00000472585 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
VCL-204ENST00000472585 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 SLC51AQ86UW1 340 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 CAPNS2Q96L46 248 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 GPR101Q96P66 508 aaPredicted RBP12.56□□□□□ -0.4
VCL-204ENST00000472585 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
VCL-204ENST00000472585 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms