RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	ARX	Q96QS3	562 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	LNPK	Q9C0E8	428 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ZBTB3	Q9H5J0	574 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	DCTPP1	Q9H773	170 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	TJP1	Q07157	1748 aa		13.43	□□□□□ -0.26
MRPS18B-208	ENST00000472267	NEURL1B	A8MQ27	555 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ATP5J2-PTCD1	G3V325	749 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	APBB1	O00213	710 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	CYP19A1	P11511	503 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ATP6V1A	P38606	617 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ATP8B2	P98198	1209 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	CHD1L	Q86WJ1	897 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PALLD	Q8WX93	1383 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	LOC102724428	A0A0B4J2F2	783 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PNMA6E	A0A0J9YXQ4	647 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	GRM8	O00222	908 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PDE4A	P27815	886 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	SIK1	P57059	783 aa		13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	SMARCC1	Q92922	1105 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.42	□□□□□ -0.26
MRPS18B-208	ENST00000472267	KIF6	Q6ZMV9	814 aa		13.41	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PTF1A	Q7RTS3	328 aa		13.41	□□□□□ -0.26
MRPS18B-208	ENST00000472267	NUP188	Q5SRE5	1749 aa		13.41	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ONECUT3	O60422	494 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	GCKR	Q14397	625 aa		13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	PPP1R42	Q7Z4L9	355 aa		13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	HDAC5	Q9UQL6	1122 aa		13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	ZBTB1	Q9Y2K1	713 aa		13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	RBM19	Q9Y4C8	960 aa	Known RBP	13.4	□□□□□ -0.26
MRPS18B-208	ENST00000472267	JARID2	Q92833	1246 aa	Predicted RBP	13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SUCLG2	Q96I99	432 aa		13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	EXOC6B	Q9Y2D4	811 aa		13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	BTAF1	O14981	1849 aa		13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SRGAP3	O43295	1099 aa		13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	ITPK1	Q13572	414 aa		13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	NPM2	Q86SE8	214 aa	Known RBP	13.39	□□□□□ -0.27
MRPS18B-208	ENST00000472267	UTY	O14607	1347 aa		13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267	NHS	Q6T4R5	1651 aa		13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SMARCA5	O60264	1052 aa	Predicted RBP	13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267	CRKL	P46109	303 aa	Known RBP	13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267	BACH2	Q9BYV9	841 aa		13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267	CCDC87	Q9NVE4	849 aa		13.38	□□□□□ -0.27
MRPS18B-208	ENST00000472267		A0A087WZG4	1122 aa		13.37	□□□□□ -0.27
MRPS18B-208	ENST00000472267	FAM161A	Q3B820	660 aa		13.37	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SSH3	Q8TE77	659 aa		13.37	□□□□□ -0.27
MRPS18B-208	ENST00000472267	MAP3K15	Q6ZN16	1313 aa		13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	IL6ST	P40189	918 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	KCNQ4	P56696	695 aa		13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	ZNF772	Q68DY9	489 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	INTS5	Q6P9B9	1019 aa	Known RBP	13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	UBE3B	Q7Z3V4	1068 aa		13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	BICC1	Q9H694	974 aa	Known RBP	13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	CWC25	Q9NXE8	425 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	BRWD3	Q6RI45	1802 aa		13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SBF2	Q86WG5	1849 aa		13.36	□□□□□ -0.27
MRPS18B-208	ENST00000472267	SURF6	O75683	361 aa	Known RBP	13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	POLA2	Q14181	598 aa		13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	RTL5	Q5HYW3	569 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	DZIP3	Q86Y13	1208 aa	Known RBP	13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	KAZALD1	Q96I82	304 aa		13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	TBC1D2B	Q9UPU7	963 aa		13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	TCIRG1	Q13488	830 aa		13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	HLF	Q16534	295 aa		13.35	□□□□□ -0.27
MRPS18B-208	ENST00000472267	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	MYH14	Q7Z406	1995 aa	Known RBP	13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	C8orf34	Q49A92	452 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	EPHA10	Q5JZY3	1008 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	KRT27	Q7Z3Y8	459 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	CCDC191	Q8NCU4	936 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	LINC00116	Q8NCU8	138 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	ISCA1	Q9BUE6	129 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	LRRCC1	Q9C099	1032 aa		13.34	□□□□□ -0.27
MRPS18B-208	ENST00000472267	CIC	Q96RK0	1608 aa	Predicted RBP	13.33	□□□□□ -0.27
MRPS18B-208	ENST00000472267	COL5A3	P25940	1745 aa	Predicted RBP	13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	GPT	P24298	496 aa		13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	EIF5	P55010	431 aa	Known RBP	13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RBM6	P78332	1123 aa	Known RBP	13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	OS9	Q13438	667 aa	Predicted RBP	13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	MTX1	Q13505	466 aa		13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.33	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RREB1	Q92766	1687 aa		13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267		H7C1W4	665 aa		13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	HSP90AB3P	Q58FF7	597 aa		13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	PA2G4	Q9UQ80	394 aa	Known RBP	13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	NUP98	P52948	1817 aa		13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	ZNF831	Q5JPB2	1677 aa		13.32	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RAB11FIP3	O75154	756 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	CASP7	P55210	303 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	FAM196A	Q6ZSG2	479 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	PLEKHM2	Q8IWE5	1019 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	CCNL1	Q9UK58	526 aa	Predicted RBP	13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	ERVV-1	B6SEH8	477 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	HSP90AB4P	Q58FF6	505 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	IL1RAPL2	Q9NP60	686 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	CHMP3	Q9Y3E7	222 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	ANKRD36C	Q5JPF3	1778 aa		13.31	□□□□□ -0.28
MRPS18B-208	ENST00000472267	TRIM28	Q13263	835 aa	Known RBP	13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms