RNA–Protein interactions for RNA: ENST00000463014.1

YKT6-205, Transcript of YKT6 v-SNARE homolog, human

TSL 3

Gene YKT6, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YKT6-205	ENST00000463014	ARFGEF2	Q9Y6D5	1785 aa		11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	PER1	O15534	1290 aa	Predicted RBP	11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	DDN	O94850	711 aa	Predicted RBP	11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	CAMTA2	O94983	1202 aa		11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	PRPF40B	Q6NWY9	871 aa	Known RBP	11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	PRDM10	Q9NQV6	1147 aa		11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	ZNF652	Q9Y2D9	606 aa		11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.24	□□□□□ -0.61
YKT6-205	ENST00000463014	UBR2	Q8IWV8	1755 aa		11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	CCDC93	Q567U6	631 aa		11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	DZIP3	Q86Y13	1208 aa	Known RBP	11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	MKRN1	Q9UHC7	482 aa	Known RBP	11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	PASK	Q96RG2	1323 aa		11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	NPC1L1	Q9UHC9	1359 aa		11.23	□□□□□ -0.61
YKT6-205	ENST00000463014	KLRG2	A4D1S0	409 aa	Predicted RBP	11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	BTBD11	A6QL63	1104 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	U2SURP	O15042	1029 aa	Known RBP	11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	A1BG	P04217	495 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	CENPB	P07199	599 aa	Predicted RBP	11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	NPR1	P16066	1061 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	CNTNAP1	P78357	1384 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	SCN7A	Q01118	1682 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	TPTE2	Q6XPS3	522 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	RTKN2	Q8IZC4	609 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	CCDC24	Q8N4L8	307 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	CEMIP	Q8WUJ3	1361 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	C7orf43	Q8WVR3	580 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	AIDA	Q96BJ3	306 aa		11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.22	□□□□□ -0.61
YKT6-205	ENST00000463014	SCN4A	P35499	1836 aa		11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	KIF7	Q2M1P5	1343 aa		11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	TMEM88B	A6NKF7	163 aa		11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	ALDH1B1	P30837	517 aa		11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	MLLT1	Q03111	559 aa	Predicted RBP	11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	CC2D1B	Q5T0F9	858 aa	Known RBP	11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	PNMA8A	Q86V59	439 aa	Predicted RBP	11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	MIER1	Q8N108	512 aa		11.21	□□□□□ -0.61
YKT6-205	ENST00000463014	ITGBL1	O95965	494 aa	Predicted RBP	11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	SNRPA1	P09661	255 aa	Known RBP	11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	POTEI	P0CG38	1075 aa		11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	POTEJ	P0CG39	1038 aa		11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	CTCF	P49711	727 aa	Predicted RBP	11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	HACL1	Q9UJ83	578 aa		11.2	□□□□□ -0.62
YKT6-205	ENST00000463014	FOXN1	O15353	648 aa		11.19	□□□□□ -0.62
YKT6-205	ENST00000463014	USP16	Q9Y5T5	823 aa		11.19	□□□□□ -0.62
YKT6-205	ENST00000463014	EPHX2	P34913	555 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	GRIPAP1	Q4V328	841 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	CC2D2B	Q6DHV5	1058 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	GPC2	Q8N158	579 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	RTF1	Q92541	710 aa	Known RBP	11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	CFAP53	Q96M91	514 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	WBP1L	Q9NX94	342 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	CLEC11A	Q9Y240	323 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	NUDC	Q9Y266	331 aa		11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	COL3A1	P02461	1466 aa	Predicted RBP	11.18	□□□□□ -0.62
YKT6-205	ENST00000463014	RASSF10	A6NK89	507 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	FZD9	O00144	591 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	HTATSF1	O43719	755 aa	Known RBP	11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	VEGFB	P49765	207 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	MAP2K1	Q02750	393 aa	Predicted RBP	11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	DEFB115	Q30KQ5	88 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	EAPP	Q56P03	285 aa	Predicted RBP	11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	JDP2	Q8WYK2	163 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	ABHD8	Q96I13	439 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	PSMD1	Q99460	953 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	BCOR	Q6W2J9	1755 aa		11.17	□□□□□ -0.62
YKT6-205	ENST00000463014	KCNQ3	O43525	872 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	GTF2E1	P29083	439 aa	Predicted RBP	11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	PRKAR2B	P31323	418 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	IARS	P41252	1262 aa	Known RBP	11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	CNTROB	Q8N137	903 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	PHACTR3	Q96KR7	559 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	RSPH6A	Q9H0K4	717 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	SLX4	Q8IY92	1834 aa		11.16	□□□□□ -0.62
YKT6-205	ENST00000463014	CCDC85C	A6NKD9	419 aa		11.15	□□□□□ -0.62
YKT6-205	ENST00000463014	SYNE4	Q8N205	404 aa		11.15	□□□□□ -0.62
YKT6-205	ENST00000463014	NYX	Q9GZU5	481 aa		11.15	□□□□□ -0.62
YKT6-205	ENST00000463014	SIPA1L3	O60292	1781 aa	Predicted RBP	11.15	□□□□□ -0.62
YKT6-205	ENST00000463014	ZNF541	Q9H0D2	1346 aa		11.14	□□□□□ -0.63
YKT6-205	ENST00000463014	ERVV-1	B6SEH8	477 aa		11.14	□□□□□ -0.63
YKT6-205	ENST00000463014	EIF6	P56537	245 aa	Known RBP	11.14	□□□□□ -0.63
YKT6-205	ENST00000463014	CRY2	Q49AN0	593 aa		11.14	□□□□□ -0.63
YKT6-205	ENST00000463014	RNF123	Q5XPI4	1314 aa		11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	PRAMEF22	A3QJZ6	481 aa		11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	NBPF26	B4DH59	902 aa		11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	LMOD1	P29536	600 aa	Predicted RBP	11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	PIP4K2A	P48426	406 aa	Predicted RBP	11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	LBX1	P52954	281 aa		11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	TAF7	Q15545	349 aa	Predicted RBP	11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	MAP1S	Q66K74	1059 aa	Predicted RBP	11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	NBPF10	Q6P3W6	841 aa	Known RBP	11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	NBPF15	Q8N660	670 aa		11.13	□□□□□ -0.63
YKT6-205	ENST00000463014	WDR33	Q9C0J8	1336 aa	Known RBP	11.12	□□□□□ -0.63
YKT6-205	ENST00000463014	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.12	□□□□□ -0.63
YKT6-205	ENST00000463014	HOXA10	P31260	410 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms