RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 POLR3AO14802 1390 aaPredicted RBP8.07□□□□□ -1.12
NUP98-208ENST00000461047 ATP7BP35670 1465 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 NALCNQ8IZF0 1738 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 ST8SIA5O15466 376 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 CTHP32929 405 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 KCNH2Q12809 1159 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 CTC1Q2NKJ3 1217 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
NUP98-208ENST00000461047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.06□□□□□ -1.12
NUP98-208ENST00000461047 TSC1Q92574 1164 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
NUP98-208ENST00000461047 SOS2Q07890 1332 aaPredicted RBP8.05□□□□□ -1.12
NUP98-208ENST00000461047 SKOR1P84550 965 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
NUP98-208ENST00000461047 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 COG3Q96JB2 828 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 UNC93B1Q9H1C4 597 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 SBNO1A3KN83 1393 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 ARHGEF10O15013 1369 aa8.05□□□□□ -1.12
NUP98-208ENST00000461047 TTC21BQ7Z4L5 1316 aa8.04□□□□□ -1.12
NUP98-208ENST00000461047 CPSF1Q10570 1443 aaKnown RBP8.04□□□□□ -1.12
NUP98-208ENST00000461047 EDC4Q6P2E9 1401 aaKnown RBP8.04□□□□□ -1.12
NUP98-208ENST00000461047 AVPP01185 164 aa8.04□□□□□ -1.12
NUP98-208ENST00000461047 KCNH5Q8NCM2 988 aa8.04□□□□□ -1.12
NUP98-208ENST00000461047 KIF1AQ12756 1690 aa8.04□□□□□ -1.12
NUP98-208ENST00000461047 SPATA31A3Q5VYP0 1347 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 USP6P35125 1406 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 A0A1W2PP64 1363 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 NSD2O96028 1365 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 MORC1Q86VD1 984 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 CABLES1Q8TDN4 633 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 ITSN1Q15811 1721 aa8.03□□□□□ -1.12
NUP98-208ENST00000461047 XIRP1Q702N8 1843 aaKnown RBP8.02□□□□□ -1.13
NUP98-208ENST00000461047 CFAP99D6REC4 459 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 J3QL48 77 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 SMPD1P17405 629 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 HSPA1LP34931 641 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 CLK2P49760 499 aaKnown RBP8.02□□□□□ -1.13
NUP98-208ENST00000461047 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
NUP98-208ENST00000461047 BAP1Q92560 729 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 DDX17Q92841 729 aaKnown RBP8.02□□□□□ -1.13
NUP98-208ENST00000461047 CARD14Q9BXL6 1004 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 NSD3Q9BZ95 1437 aa8.02□□□□□ -1.13
NUP98-208ENST00000461047 JCADQ9P266 1359 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 FYB1O15117 783 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
NUP98-208ENST00000461047 ANP32CO43423 234 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 SH3BP2P78314 561 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 RALBP1Q15311 655 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 TUSC1Q2TAM9 212 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 WASF2Q9Y6W5 498 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 TNS3Q68CZ2 1445 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 SPATA31A6Q5VVP1 1343 aa8.01□□□□□ -1.13
NUP98-208ENST00000461047 NPC1L1Q9UHC9 1359 aa8□□□□□ -1.13
NUP98-208ENST00000461047 ROBO1Q9Y6N7 1651 aa8□□□□□ -1.13
NUP98-208ENST00000461047 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
NUP98-208ENST00000461047 CC2D1BQ5T0F9 858 aaKnown RBP8□□□□□ -1.13
NUP98-208ENST00000461047 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
NUP98-208ENST00000461047 NME9Q86XW9 330 aa8□□□□□ -1.13
NUP98-208ENST00000461047 ZNF511Q8NB15 262 aa8□□□□□ -1.13
NUP98-208ENST00000461047 GGNBP2Q9H3C7 697 aa8□□□□□ -1.13
NUP98-208ENST00000461047 USP32Q8NFA0 1604 aa8□□□□□ -1.13
NUP98-208ENST00000461047 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 GCP02774 474 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 CNGB1Q14028 1251 aaPredicted RBP7.99□□□□□ -1.13
NUP98-208ENST00000461047 QPCTQ16769 361 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 MEX3CQ5U5Q3 659 aaKnown RBP7.99□□□□□ -1.13
NUP98-208ENST00000461047 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 AHDC1Q5TGY3 1603 aaPredicted RBP7.99□□□□□ -1.13
NUP98-208ENST00000461047 PXDNQ92626 1479 aa7.99□□□□□ -1.13
NUP98-208ENST00000461047 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 LILRB3O75022 631 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 VARSP26640 1264 aaKnown RBP7.98□□□□□ -1.13
NUP98-208ENST00000461047 AMPHP49418 695 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 AGERQ15109 404 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 DIEXFQ68CQ4 756 aaKnown RBP7.98□□□□□ -1.13
NUP98-208ENST00000461047 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
NUP98-208ENST00000461047 CD163L1Q9NR16 1453 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 TOPAZ1Q8N9V7 1692 aa7.98□□□□□ -1.13
NUP98-208ENST00000461047 HPS1Q92902 700 aa7.97□□□□□ -1.13
NUP98-208ENST00000461047 PRDM11Q9NQV5 511 aa7.97□□□□□ -1.13
NUP98-208ENST00000461047 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
NUP98-208ENST00000461047 PNPLA6Q8IY17 1366 aa7.97□□□□□ -1.13
NUP98-208ENST00000461047 POTECB2RU33 542 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 PPM1GO15355 546 aaPredicted RBP7.96□□□□□ -1.14
NUP98-208ENST00000461047 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.14
NUP98-208ENST00000461047 EVA1CP58658 441 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 NGLY1Q96IV0 654 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms