RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 IGKV5-2P06315 115 aa13.24□□□□□ -0.29
NEDD9-205ENST00000459670 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
NEDD9-205ENST00000459670 MEIS3Q99687 375 aa13.24□□□□□ -0.29
NEDD9-205ENST00000459670 RXRBP28702 533 aa13.23□□□□□ -0.29
NEDD9-205ENST00000459670 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
NEDD9-205ENST00000459670 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
NEDD9-205ENST00000459670 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
NEDD9-205ENST00000459670 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
NEDD9-205ENST00000459670 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
NEDD9-205ENST00000459670 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
NEDD9-205ENST00000459670 LRP5O75197 1615 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 A0A0G2JS52 829 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 MYL6BP14649 208 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 IL6STP40189 918 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-205ENST00000459670 MYT1Q01538 1121 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 HDAC1Q13547 482 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-205ENST00000459670 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
NEDD9-205ENST00000459670 USP44Q9H0E7 712 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
NEDD9-205ENST00000459670 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
NEDD9-205ENST00000459670 STARD3NLO95772 234 aa13.21□□□□□ -0.29
NEDD9-205ENST00000459670 IGHDP01880 384 aa13.21□□□□□ -0.29
NEDD9-205ENST00000459670 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.29
NEDD9-205ENST00000459670 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
NEDD9-205ENST00000459670 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
NEDD9-205ENST00000459670 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
NEDD9-205ENST00000459670 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
NEDD9-205ENST00000459670 CASP7P55210 303 aa13.2□□□□□ -0.3
NEDD9-205ENST00000459670 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
NEDD9-205ENST00000459670 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
NEDD9-205ENST00000459670 LRRC4BQ9NT99 713 aa13.2□□□□□ -0.3
NEDD9-205ENST00000459670 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
NEDD9-205ENST00000459670 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
NEDD9-205ENST00000459670 RGL2O15211 777 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
NEDD9-205ENST00000459670 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
NEDD9-205ENST00000459670 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
NEDD9-205ENST00000459670 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 PROM2Q8N271 834 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
NEDD9-205ENST00000459670 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
NEDD9-205ENST00000459670 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
NEDD9-205ENST00000459670 MTX1Q13505 466 aa13.17□□□□□ -0.3
NEDD9-205ENST00000459670 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
NEDD9-205ENST00000459670 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
NEDD9-205ENST00000459670 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
NEDD9-205ENST00000459670 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
NEDD9-205ENST00000459670 PLSCR1O15162 318 aa13.16□□□□□ -0.3
NEDD9-205ENST00000459670 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
NEDD9-205ENST00000459670 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
NEDD9-205ENST00000459670 GCKRQ14397 625 aa13.16□□□□□ -0.3
NEDD9-205ENST00000459670 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
NEDD9-205ENST00000459670 TRIM37O94972 964 aa13.15□□□□□ -0.3
NEDD9-205ENST00000459670 GNAI3P08754 354 aa13.15□□□□□ -0.3
NEDD9-205ENST00000459670 KCNQ4P56696 695 aa13.15□□□□□ -0.3
NEDD9-205ENST00000459670 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
NEDD9-205ENST00000459670 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
NEDD9-205ENST00000459670 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 GRM8O00222 908 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 POLA2Q14181 598 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 HLFQ16534 295 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
NEDD9-205ENST00000459670 MYD88Q99836 296 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 COL4A1P02462 1669 aa13.14□□□□□ -0.31
NEDD9-205ENST00000459670 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 H7C1W4 665 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 GNAI2P04899 355 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
NEDD9-205ENST00000459670 ZNF34Q8IZ26 560 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 ZBTB3Q9H5J0 574 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
NEDD9-205ENST00000459670 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
NEDD9-205ENST00000459670 PNMA6EA0A0J9YXQ4 647 aa13.12□□□□□ -0.31
NEDD9-205ENST00000459670 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
NEDD9-205ENST00000459670 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
NEDD9-205ENST00000459670 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
NEDD9-205ENST00000459670 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
NEDD9-205ENST00000459670 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
NEDD9-205ENST00000459670 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
NEDD9-205ENST00000459670 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
NEDD9-205ENST00000459670 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
NEDD9-205ENST00000459670 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
NEDD9-205ENST00000459670 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
NEDD9-205ENST00000459670 NEXNQ0ZGT2 675 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms