RNA–Protein interactions for RNA: ENST00000458580.6

EXD1-202, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EXD1, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-202ENST00000458580 LMTK3Q96Q04 1460 aa7.97□□□□□ -1.13
EXD1-202ENST00000458580 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 HSPA4P34932 840 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 HMGN5P82970 282 aaKnown RBP7.96□□□□□ -1.14
EXD1-202ENST00000458580 RHPN1Q8TCX5 695 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 KIF1BPQ96EK5 621 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 ANO2Q9NQ90 1003 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 CAMTA1Q9Y6Y1 1673 aa7.96□□□□□ -1.14
EXD1-202ENST00000458580 PRPF40AO75400 957 aaKnown RBP7.95□□□□□ -1.14
EXD1-202ENST00000458580 MTX1Q13505 466 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 CAVIN1Q6NZI2 390 aaKnown RBP7.95□□□□□ -1.14
EXD1-202ENST00000458580 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 DNAAF4Q8WXU2 420 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 IL1RAPL2Q9NP60 686 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 SLIT3O75094 1523 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 ADCY9O60503 1353 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 HEG1Q9ULI3 1381 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 SGSM2O43147 1006 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 SURF6O75683 361 aaKnown RBP7.95□□□□□ -1.14
EXD1-202ENST00000458580 FAM193AP78312 1265 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 HSP90AB4PQ58FF6 505 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 NUTM1Q86Y26 1132 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 PRIMPOLQ96LW4 560 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 DNAJC2Q99543 621 aaKnown RBP7.95□□□□□ -1.14
EXD1-202ENST00000458580 IL25Q9H293 177 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 R3HCC1Q9Y3T6 440 aaKnown RBP7.95□□□□□ -1.14
EXD1-202ENST00000458580 RAD50Q92878 1312 aa7.95□□□□□ -1.14
EXD1-202ENST00000458580 KCNQ3O43525 872 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 MBD3O95983 291 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 NBPF7P0C2Y1 421 aaPredicted RBP7.94□□□□□ -1.14
EXD1-202ENST00000458580 RBSNQ9H1K0 784 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 CHPF2Q9P2E5 772 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 ZNF142P52746 1687 aaPredicted RBP7.94□□□□□ -1.14
EXD1-202ENST00000458580 ADAMTS7Q9UKP4 1686 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 SRGAP3O43295 1099 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 ALDH1L1O75891 902 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 AMOTQ4VCS5 1084 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 PLEKHO1Q53GL0 409 aaPredicted RBP7.94□□□□□ -1.14
EXD1-202ENST00000458580 PDLIM2Q96JY6 352 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 LSG1Q9H089 658 aaKnown RBP7.94□□□□□ -1.14
EXD1-202ENST00000458580 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 TTC41PQ6P2S7 1318 aa7.94□□□□□ -1.14
EXD1-202ENST00000458580 RGPD2P0DJD1 1756 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 CCDC66A2RUB6 948 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 PI4KAP2A4QPH2 592 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 SOCS7O14512 581 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 RNMTO43148 476 aaKnown RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 EIF2S2P20042 333 aaKnown RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 GTF2F1P35269 517 aaKnown RBP eCLIP7.93□□□□□ -1.14
EXD1-202ENST00000458580 ZNF530Q6P9A1 599 aaPredicted RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 LRSAM1Q6UWE0 723 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 PI4KAP1Q8N8J0 262 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 TTC14Q96N46 770 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 PXDNQ92626 1479 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 PRIM1P49642 420 aaKnown RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 IRX3P78415 501 aaPredicted RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 TEFQ10587 303 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 ARHGEF25Q86VW2 580 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 ANKLE2Q86XL3 938 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 CREBRFQ8IUR6 639 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 CNTROBQ8N137 903 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 CHAMP1Q96JM3 812 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 NSFL1CQ9UNZ2 370 aaKnown RBP7.93□□□□□ -1.14
EXD1-202ENST00000458580 SNX14Q9Y5W7 946 aa7.93□□□□□ -1.14
EXD1-202ENST00000458580 SIPA1L3O60292 1781 aaPredicted RBP7.92□□□□□ -1.14
EXD1-202ENST00000458580 KDM4FA0A1W2PPD8 638 aa7.92□□□□□ -1.14
EXD1-202ENST00000458580 BTBD11A6QL63 1104 aa7.92□□□□□ -1.14
EXD1-202ENST00000458580 GLRX3O76003 335 aaKnown RBP7.92□□□□□ -1.14
EXD1-202ENST00000458580 DNTTIP2Q5QJE6 756 aaKnown RBP7.92□□□□□ -1.14
EXD1-202ENST00000458580 KCNB2Q92953 911 aa7.92□□□□□ -1.14
EXD1-202ENST00000458580 UPF3BQ9BZI7 483 aaKnown RBP7.92□□□□□ -1.14
EXD1-202ENST00000458580 ZKSCAN5Q9Y2L8 839 aa7.92□□□□□ -1.14
EXD1-202ENST00000458580 MST1RQ04912 1400 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 RPAP1Q9BWH6 1393 aaPredicted RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 UTYO14607 1347 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 WDR33Q9C0J8 1336 aaKnown RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 GIGYF1O75420 1035 aaPredicted RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 GABPB1Q06547 395 aaPredicted RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 TMEM87AQ8NBN3 555 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 MYRIPQ8NFW9 859 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 LRRC59Q96AG4 307 aaKnown RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 PSME1Q06323 249 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 KSR2Q6VAB6 950 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 FEZ1Q99689 392 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 CCDC39Q9UFE4 941 aa7.91□□□□□ -1.14
EXD1-202ENST00000458580 TRPM3Q9HCF6 1732 aaPredicted RBP7.91□□□□□ -1.14
EXD1-202ENST00000458580 MAP4K4O95819 1239 aaPredicted RBP7.9□□□□□ -1.14
EXD1-202ENST00000458580 GCP02774 474 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 ANXA1P04083 346 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 MPRIPQ6WCQ1 1025 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 ERC1Q8IUD2 1116 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 TM6SF1Q9BZW5 370 aa7.9□□□□□ -1.14
EXD1-202ENST00000458580 YY1AP1Q9H869 796 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms