RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PLBD2Q8NHP8 589 aa11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 CWF19L2Q2TBE0 894 aaKnown RBP11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 RPAP2Q8IXW5 612 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 TJP1Q07157 1748 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 MYD88Q99836 296 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 NHSQ6T4R5 1651 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 TTLL7Q6ZT98 887 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 ARXQ96QS3 562 aa11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
SMPD4P1-203ENST00000443839 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 HMMRO75330 724 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 SMC5Q8IY18 1101 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 BTAF1O14981 1849 aa11.88□□□□□ -0.51
SMPD4P1-203ENST00000443839 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 RGS3P49796 1198 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 ZBTB1Q9Y2K1 713 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 GRM8O00222 908 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 ITPK1Q13572 414 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 HDAC5Q9UQL6 1122 aa11.87□□□□□ -0.51
SMPD4P1-203ENST00000443839 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 CCDC87Q9NVE4 849 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 GCKRQ14397 625 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
SMPD4P1-203ENST00000443839 NUP188Q5SRE5 1749 aa11.85□□□□□ -0.51
SMPD4P1-203ENST00000443839 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
SMPD4P1-203ENST00000443839 AFDNP55196 1824 aaKnown RBP11.85□□□□□ -0.51
SMPD4P1-203ENST00000443839 RXRBP28702 533 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 IBTKQ9P2D0 1353 aaPredicted RBP11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 NUCB1Q02818 461 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 UTYO14607 1347 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
SMPD4P1-203ENST00000443839 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 KCNQ4P56696 695 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 A0A087WZG4 1122 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 TBC1D2BQ9UPU7 963 aa11.83□□□□□ -0.52
SMPD4P1-203ENST00000443839 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
SMPD4P1-203ENST00000443839 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
SMPD4P1-203ENST00000443839 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
SMPD4P1-203ENST00000443839 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
SMPD4P1-203ENST00000443839 APBB1O00213 710 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 TRIM37O94972 964 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 SUCLG2Q96I99 432 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 RREB1Q92766 1687 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
SMPD4P1-203ENST00000443839 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 LY75O60449 1722 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 MTX1Q13505 466 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 HLFQ16534 295 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 KAZALD1Q96I82 304 aa11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 RGS17Q9UGC6 210 aaPredicted RBP11.8□□□□□ -0.52
SMPD4P1-203ENST00000443839 COL15A1P39059 1388 aa11.79□□□□□ -0.52
SMPD4P1-203ENST00000443839 GPTP24298 496 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms