RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 BARGINQ6ZT62 677 aa18.47■□□□□ 0.55
IFT140-204ENST00000439987 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
IFT140-204ENST00000439987 KAT6BQ8WYB5 2073 aa18.47■□□□□ 0.55
IFT140-204ENST00000439987 GCKRQ14397 625 aa18.46■□□□□ 0.55
IFT140-204ENST00000439987 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
IFT140-204ENST00000439987 TEX13AQ9BXU3 409 aaPredicted RBP18.46■□□□□ 0.55
IFT140-204ENST00000439987 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
IFT140-204ENST00000439987 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
IFT140-204ENST00000439987 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
IFT140-204ENST00000439987 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
IFT140-204ENST00000439987 RAB11FIP3O75154 756 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
IFT140-204ENST00000439987 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
IFT140-204ENST00000439987 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
IFT140-204ENST00000439987 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
IFT140-204ENST00000439987 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
IFT140-204ENST00000439987 PRIM1P49642 420 aaKnown RBP18.43■□□□□ 0.54
IFT140-204ENST00000439987 DNAJC10Q8IXB1 793 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 TTLL7Q6ZT98 887 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 TBC1D32Q96NH3 1257 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 BCL9LQ86UU0 1499 aa18.43■□□□□ 0.54
IFT140-204ENST00000439987 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
IFT140-204ENST00000439987 SALL3Q9BXA9 1300 aa18.42■□□□□ 0.54
IFT140-204ENST00000439987 PDE1AP54750 535 aa18.42■□□□□ 0.54
IFT140-204ENST00000439987 MARCH10Q8NA82 808 aaPredicted RBP18.42■□□□□ 0.54
IFT140-204ENST00000439987 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
IFT140-204ENST00000439987 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
IFT140-204ENST00000439987 STARD3NLO95772 234 aa18.41■□□□□ 0.54
IFT140-204ENST00000439987 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
IFT140-204ENST00000439987 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
IFT140-204ENST00000439987 NUP188Q5SRE5 1749 aa18.41■□□□□ 0.54
IFT140-204ENST00000439987 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
IFT140-204ENST00000439987 VPS72Q15906 364 aa18.41■□□□□ 0.54
IFT140-204ENST00000439987 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
IFT140-204ENST00000439987 CDC45O75419 566 aa18.4■□□□□ 0.54
IFT140-204ENST00000439987 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
IFT140-204ENST00000439987 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
IFT140-204ENST00000439987 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
IFT140-204ENST00000439987 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
IFT140-204ENST00000439987 MX1P20591 662 aa18.39■□□□□ 0.53
IFT140-204ENST00000439987 IL1RAPL2Q9NP60 686 aa18.39■□□□□ 0.53
IFT140-204ENST00000439987 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
IFT140-204ENST00000439987 A0A087WZG4 1122 aa18.38■□□□□ 0.53
IFT140-204ENST00000439987 SDSP20132 328 aa18.38■□□□□ 0.53
IFT140-204ENST00000439987 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
IFT140-204ENST00000439987 COL15A1P39059 1388 aa18.38■□□□□ 0.53
IFT140-204ENST00000439987 UBE3BQ7Z3V4 1068 aa18.37■□□□□ 0.53
IFT140-204ENST00000439987 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
IFT140-204ENST00000439987 STAP2Q9UGK3 403 aa18.37■□□□□ 0.53
IFT140-204ENST00000439987 CYP19A1P11511 503 aaPredicted RBP18.37■□□□□ 0.53
IFT140-204ENST00000439987 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
IFT140-204ENST00000439987 EPHA10Q5JZY3 1008 aa18.37■□□□□ 0.53
IFT140-204ENST00000439987 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
IFT140-204ENST00000439987 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
IFT140-204ENST00000439987 PA2G4Q9UQ80 394 aaKnown RBP18.36■□□□□ 0.53
IFT140-204ENST00000439987 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
IFT140-204ENST00000439987 CASP7P55210 303 aa18.36■□□□□ 0.53
IFT140-204ENST00000439987 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
IFT140-204ENST00000439987 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 ERC1Q8IUD2 1116 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 AOX1Q06278 1338 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
IFT140-204ENST00000439987 A0A0G2JS52 829 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 H7C1W4 665 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 USP21Q9UK80 565 aa18.35■□□□□ 0.53
IFT140-204ENST00000439987 TJP1Q07157 1748 aa18.34■□□□□ 0.53
IFT140-204ENST00000439987 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
IFT140-204ENST00000439987 KIF6Q6ZMV9 814 aa18.34■□□□□ 0.53
IFT140-204ENST00000439987 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
IFT140-204ENST00000439987 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
IFT140-204ENST00000439987 HSPA1LP34931 641 aa18.33■□□□□ 0.52
IFT140-204ENST00000439987 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
IFT140-204ENST00000439987 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
IFT140-204ENST00000439987 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
IFT140-204ENST00000439987 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
IFT140-204ENST00000439987 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
IFT140-204ENST00000439987 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
IFT140-204ENST00000439987 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
IFT140-204ENST00000439987 CASC1Q6TDU7 716 aa18.32■□□□□ 0.52
IFT140-204ENST00000439987 CLASRPQ8N2M8 674 aaKnown RBP18.32■□□□□ 0.52
IFT140-204ENST00000439987 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
IFT140-204ENST00000439987 TRIM28Q13263 835 aaKnown RBP18.3■□□□□ 0.52
IFT140-204ENST00000439987 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 SASH1O94885 1247 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 IL6STP40189 918 aaPredicted RBP18.3■□□□□ 0.52
IFT140-204ENST00000439987 RFX5P48382 616 aaPredicted RBP18.3■□□□□ 0.52
IFT140-204ENST00000439987 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 SIK1P57059 783 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 ARXQ96QS3 562 aa18.3■□□□□ 0.52
IFT140-204ENST00000439987 USP42Q9H9J4 1324 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms