RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 PTPRCP08575 1304 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 KIF20AO95235 890 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 CEP135Q66GS9 1140 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
TSC2-206ENST00000439117 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
TSC2-206ENST00000439117 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
TSC2-206ENST00000439117 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
TSC2-206ENST00000439117 SH2B1Q9NRF2 756 aaPredicted RBP17.42■□□□□ 0.38
TSC2-206ENST00000439117 ZSCAN23Q3MJ62 389 aa17.42■□□□□ 0.38
TSC2-206ENST00000439117 TRIM27P14373 513 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 SNW1Q13573 536 aaKnown RBP17.41■□□□□ 0.38
TSC2-206ENST00000439117 FEZ1Q99689 392 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 TRMT1Q9NXH9 659 aaKnown RBP17.41■□□□□ 0.38
TSC2-206ENST00000439117 EZRP15311 586 aaKnown RBP17.41■□□□□ 0.38
TSC2-206ENST00000439117 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 ZPR1O75312 459 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 TAF4BQ92750 862 aa17.41■□□□□ 0.38
TSC2-206ENST00000439117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.41■□□□□ 0.38
TSC2-206ENST00000439117 DNMT1P26358 1616 aaKnown RBP17.4■□□□□ 0.38
TSC2-206ENST00000439117 GLRX3O76003 335 aaKnown RBP17.4■□□□□ 0.38
TSC2-206ENST00000439117 CDKL5O76039 1030 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
TSC2-206ENST00000439117 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 C19orf44Q9H6X5 657 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 SYCP1Q15431 976 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 RNF187Q5TA31 235 aaPredicted RBP17.4■□□□□ 0.38
TSC2-206ENST00000439117 TEX13AQ9BXU3 409 aaPredicted RBP17.4■□□□□ 0.38
TSC2-206ENST00000439117 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
TSC2-206ENST00000439117 MX1P20591 662 aa17.39■□□□□ 0.37
TSC2-206ENST00000439117 LUZP1Q86V48 1076 aa17.39■□□□□ 0.37
TSC2-206ENST00000439117 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
TSC2-206ENST00000439117 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
TSC2-206ENST00000439117 KDM4AO75164 1064 aa17.39■□□□□ 0.37
TSC2-206ENST00000439117 ARHGEF12Q9NZN5 1544 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
TSC2-206ENST00000439117 FERMT3Q86UX7 667 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 ATP10AO60312 1499 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 PZPP20742 1482 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 TUBB4AP04350 444 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 GOLGA6L10A0A0M3HER8 536 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 ADGRL2O95490 1459 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
TSC2-206ENST00000439117 IDH1O75874 414 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 A0A087WZG4 1122 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 KCNA6P17658 529 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 UBE2HP62256 183 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 ARFGAP3Q9NP61 516 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 ZNF165P49910 485 aa17.37■□□□□ 0.37
TSC2-206ENST00000439117 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
TSC2-206ENST00000439117 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 TOM1O60784 492 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 PARD3Q8TEW0 1356 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 CCDC150Q8NCX0 1101 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
TSC2-206ENST00000439117 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 IBSPP21815 317 aaPredicted RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
TSC2-206ENST00000439117 NF2P35240 595 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 PAFAH1B1P43034 410 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 TDO2P48775 406 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 OGFRQ9NZT2 677 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 YTHDC2Q9H6S0 1430 aaKnown RBP17.35■□□□□ 0.37
TSC2-206ENST00000439117 SAMD9Q5K651 1589 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 SPA17Q15506 151 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 ZNF397Q8NF99 534 aaPredicted RBP17.35■□□□□ 0.37
TSC2-206ENST00000439117 NPATQ14207 1427 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 TERF1P54274 439 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 HSPA2P54652 639 aa17.35■□□□□ 0.37
TSC2-206ENST00000439117 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
TSC2-206ENST00000439117 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 ABCF2Q9UG63 623 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 ANKRD62A6NC57 917 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 CCDC175P0C221 793 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 STX1AQ16623 288 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 CKAP2LQ8IYA6 745 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 SRRTQ9BXP5 876 aaKnown RBP17.34■□□□□ 0.37
TSC2-206ENST00000439117 PI4KAP2A4QPH2 592 aa17.34■□□□□ 0.37
TSC2-206ENST00000439117 PI4KAP1Q8N8J0 262 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms