RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PLEKHM2Q8IWE5 1019 aa26.23■■□□□ 1.79
PTPRF-207ENST00000436724 SSH3Q8TE77 659 aa26.23■■□□□ 1.79
PTPRF-207ENST00000436724 SRGAP3O43295 1099 aa26.22■■□□□ 1.79
PTPRF-207ENST00000436724 ACSBG1Q96GR2 724 aa26.22■■□□□ 1.79
PTPRF-207ENST00000436724 HSPA1LP34931 641 aa26.22■■□□□ 1.79
PTPRF-207ENST00000436724 SLC4A9Q96Q91 983 aa26.22■■□□□ 1.79
PTPRF-207ENST00000436724 ARFGEF2Q9Y6D5 1785 aa26.21■■□□□ 1.79
PTPRF-207ENST00000436724 ATP5J2-PTCD1G3V325 749 aa26.2■■□□□ 1.78
PTPRF-207ENST00000436724 POLA2Q14181 598 aa26.2■■□□□ 1.78
PTPRF-207ENST00000436724 FNBP4Q8N3X1 1017 aaPredicted RBP26.2■■□□□ 1.78
PTPRF-207ENST00000436724 PLBD2Q8NHP8 589 aa26.2■■□□□ 1.78
PTPRF-207ENST00000436724 SPATA31A6Q5VVP1 1343 aa26.2■■□□□ 1.78
PTPRF-207ENST00000436724 GCKRQ14397 625 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 VPS72Q15906 364 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 BMP2KLQ5H9B9 411 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 VSIG10Q8N0Z9 540 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 KAZALD1Q96I82 304 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 SUCLG2Q96I99 432 aa26.19■■□□□ 1.78
PTPRF-207ENST00000436724 UTYO14607 1347 aa26.18■■□□□ 1.78
PTPRF-207ENST00000436724 IBTKQ9P2D0 1353 aaPredicted RBP26.18■■□□□ 1.78
PTPRF-207ENST00000436724 ZNF330Q9Y3S2 320 aaPredicted RBP26.18■■□□□ 1.78
PTPRF-207ENST00000436724 NBR1Q14596 966 aa26.17■■□□□ 1.78
PTPRF-207ENST00000436724 JARID2Q92833 1246 aaPredicted RBP26.17■■□□□ 1.78
PTPRF-207ENST00000436724 LRRCC1Q9C099 1032 aa26.17■■□□□ 1.78
PTPRF-207ENST00000436724 USP21Q9UK80 565 aa26.17■■□□□ 1.78
PTPRF-207ENST00000436724 SURF6O75683 361 aaKnown RBP26.16■■□□□ 1.78
PTPRF-207ENST00000436724 ZBTB3Q9H5J0 574 aa26.16■■□□□ 1.78
PTPRF-207ENST00000436724 GSPT1P15170 499 aaKnown RBP26.16■■□□□ 1.78
PTPRF-207ENST00000436724 TEX13AQ9BXU3 409 aaPredicted RBP26.15■■□□□ 1.78
PTPRF-207ENST00000436724 BICC1Q9H694 974 aaKnown RBP26.15■■□□□ 1.78
PTPRF-207ENST00000436724 AFDNP55196 1824 aaKnown RBP26.15■■□□□ 1.78
PTPRF-207ENST00000436724 MTX1Q13505 466 aa26.14■■□□□ 1.78
PTPRF-207ENST00000436724 STARD3NLO95772 234 aa26.14■■□□□ 1.77
PTPRF-207ENST00000436724 NUP188Q5SRE5 1749 aa26.12■■□□□ 1.77
PTPRF-207ENST00000436724 IL1RAPL2Q9NP60 686 aa26.12■■□□□ 1.77
PTPRF-207ENST00000436724 KCNQ2O43526 872 aa26.12■■□□□ 1.77
PTPRF-207ENST00000436724 TTC22Q5TAA0 569 aa26.12■■□□□ 1.77
PTPRF-207ENST00000436724 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.11■■□□□ 1.77
PTPRF-207ENST00000436724 CYP19A1P11511 503 aaPredicted RBP26.11■■□□□ 1.77
PTPRF-207ENST00000436724 EPHA10Q5JZY3 1008 aa26.11■■□□□ 1.77
PTPRF-207ENST00000436724 MEX3CQ5U5Q3 659 aaKnown RBP26.11■■□□□ 1.77
PTPRF-207ENST00000436724 UBE3BQ7Z3V4 1068 aa26.11■■□□□ 1.77
PTPRF-207ENST00000436724 HDAC5Q9UQL6 1122 aa26.11■■□□□ 1.77
PTPRF-207ENST00000436724 TSHZ3Q63HK5 1081 aa26.1■■□□□ 1.77
PTPRF-207ENST00000436724 PA2G4Q9UQ80 394 aaKnown RBP26.1■■□□□ 1.77
PTPRF-207ENST00000436724 A0A087WZG4 1122 aa26.1■■□□□ 1.77
PTPRF-207ENST00000436724 ARXQ96QS3 562 aa26.09■■□□□ 1.77
PTPRF-207ENST00000436724 PDE1AP54750 535 aa26.08■■□□□ 1.77
PTPRF-207ENST00000436724 MFAP1P55081 439 aaKnown RBP26.08■■□□□ 1.77
PTPRF-207ENST00000436724 ZBTB1Q9Y2K1 713 aa26.08■■□□□ 1.77
PTPRF-207ENST00000436724 RTL5Q5HYW3 569 aaPredicted RBP26.07■■□□□ 1.76
PTPRF-207ENST00000436724 RHPN1Q8TCX5 695 aa26.07■■□□□ 1.76
PTPRF-207ENST00000436724 SALL3Q9BXA9 1300 aa26.07■■□□□ 1.76
PTPRF-207ENST00000436724 TJP1Q07157 1748 aa26.07■■□□□ 1.76
PTPRF-207ENST00000436724 RAB11FIP3O75154 756 aa26.06■■□□□ 1.76
PTPRF-207ENST00000436724 CASP7P55210 303 aa26.05■■□□□ 1.76
PTPRF-207ENST00000436724 UPF2Q9HAU5 1272 aaKnown RBP26.05■■□□□ 1.76
PTPRF-207ENST00000436724 TBC1D9Q6ZT07 1266 aa26.05■■□□□ 1.76
PTPRF-207ENST00000436724 MX1P20591 662 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 OS9Q13438 667 aaPredicted RBP26.04■■□□□ 1.76
PTPRF-207ENST00000436724 NUTM1Q86Y26 1132 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 KLHDC4Q8TBB5 520 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 KIF1BPQ96EK5 621 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 OSBPL3Q9H4L5 887 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 CWC25Q9NXE8 425 aaPredicted RBP26.04■■□□□ 1.76
PTPRF-207ENST00000436724 AFF2P51816 1311 aa26.04■■□□□ 1.76
PTPRF-207ENST00000436724 SDSP20132 328 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 LOC102724428A0A0B4J2F2 783 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 ATP6V1AP38606 617 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 SIK1P57059 783 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 FAM182BQ5T319 152 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 KIF6Q6ZMV9 814 aa26.03■■□□□ 1.76
PTPRF-207ENST00000436724 DEKP35659 375 aaKnown RBP26.02■■□□□ 1.76
PTPRF-207ENST00000436724 TBC1D32Q96NH3 1257 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 H7C1W4 665 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 HSP90AB4PQ58FF6 505 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 PTF1AQ7RTS3 328 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 DDRGK1Q96HY6 314 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 PALLDQ8WX93 1383 aa26.02■■□□□ 1.76
PTPRF-207ENST00000436724 TCIRG1Q13488 830 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 HLFQ16534 295 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 CCDC191Q8NCU4 936 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 GJD4Q96KN9 370 aaPredicted RBP26■■□□□ 1.75
PTPRF-207ENST00000436724 SIL1Q9H173 461 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 CDC45O75419 566 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 ITPK1Q13572 414 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 ISCA1Q9BUE6 129 aa26■■□□□ 1.75
PTPRF-207ENST00000436724 MAP3K15Q6ZN16 1313 aa25.99■■□□□ 1.75
PTPRF-207ENST00000436724 RABL6Q3YEC7 729 aaPredicted RBP25.99■■□□□ 1.75
PTPRF-207ENST00000436724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.99■■□□□ 1.75
PTPRF-207ENST00000436724 THSD7AQ9UPZ6 1657 aa25.98■■□□□ 1.75
PTPRF-207ENST00000436724 INTS5Q6P9B9 1019 aaKnown RBP25.97■■□□□ 1.75
PTPRF-207ENST00000436724 STAP2Q9UGK3 403 aa25.97■■□□□ 1.75
PTPRF-207ENST00000436724 TBC1D2BQ9UPU7 963 aa25.97■■□□□ 1.75
PTPRF-207ENST00000436724 CRKLP46109 303 aaKnown RBP25.97■■□□□ 1.75
PTPRF-207ENST00000436724 C22orf23Q9BZE7 217 aa25.97■■□□□ 1.75
PTPRF-207ENST00000436724 COL15A1P39059 1388 aa25.97■■□□□ 1.75
PTPRF-207ENST00000436724 SASH1O94885 1247 aa25.96■■□□□ 1.75
PTPRF-207ENST00000436724 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
PTPRF-207ENST00000436724 FOXO4P98177 505 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms