RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PRPF38BQ5VTL8 546 aaKnown RBP21.66■■□□□ 1.06
NUP50-209ENST00000432340 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
NUP50-209ENST00000432340 DGKZQ13574 1117 aa21.65■■□□□ 1.06
NUP50-209ENST00000432340 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
NUP50-209ENST00000432340 ADAMTS7Q9UKP4 1686 aa21.65■■□□□ 1.06
NUP50-209ENST00000432340 ZNF541Q9H0D2 1346 aa21.64■■□□□ 1.05
NUP50-209ENST00000432340 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
NUP50-209ENST00000432340 CYP4F22Q6NT55 531 aa21.64■■□□□ 1.05
NUP50-209ENST00000432340 JDP2Q8WYK2 163 aa21.64■■□□□ 1.05
NUP50-209ENST00000432340 TJP1Q07157 1748 aa21.63■■□□□ 1.05
NUP50-209ENST00000432340 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
NUP50-209ENST00000432340 TLL2Q9Y6L7 1015 aa21.63■■□□□ 1.05
NUP50-209ENST00000432340 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
NUP50-209ENST00000432340 FZD9O00144 591 aa21.62■■□□□ 1.05
NUP50-209ENST00000432340 BRPF1P55201 1214 aaPredicted RBP21.62■■□□□ 1.05
NUP50-209ENST00000432340 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
NUP50-209ENST00000432340 ZNF277Q9NRM2 450 aaPredicted RBP21.62■■□□□ 1.05
NUP50-209ENST00000432340 FER1L6Q2WGJ9 1857 aa21.61■■□□□ 1.05
NUP50-209ENST00000432340 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
NUP50-209ENST00000432340 EIF6P56537 245 aaKnown RBP21.61■■□□□ 1.05
NUP50-209ENST00000432340 TTC5Q8N0Z6 440 aa21.61■■□□□ 1.05
NUP50-209ENST00000432340 TSKSQ9UJT2 592 aa21.61■■□□□ 1.05
NUP50-209ENST00000432340 AFDNP55196 1824 aaKnown RBP21.61■■□□□ 1.05
NUP50-209ENST00000432340 NPR1P16066 1061 aa21.6■■□□□ 1.05
NUP50-209ENST00000432340 C7orf43Q8WVR3 580 aa21.6■■□□□ 1.05
NUP50-209ENST00000432340 HHIPL1Q96JK4 782 aa21.6■■□□□ 1.05
NUP50-209ENST00000432340 PDE4DIPQ5VU43 2346 aa21.6■■□□□ 1.05
NUP50-209ENST00000432340 IARSP41252 1262 aaKnown RBP21.59■■□□□ 1.05
NUP50-209ENST00000432340 SLC39A6Q13433 755 aa21.59■■□□□ 1.05
NUP50-209ENST00000432340 THSD7BQ9C0I4 1608 aa21.58■■□□□ 1.05
NUP50-209ENST00000432340 SULT6B1Q6IMI4 303 aa21.58■■□□□ 1.05
NUP50-209ENST00000432340 USP50Q70EL3 339 aaPredicted RBP21.58■■□□□ 1.05
NUP50-209ENST00000432340 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
NUP50-209ENST00000432340 IL6STP40189 918 aaPredicted RBP21.57■■□□□ 1.04
NUP50-209ENST00000432340 AEBP1Q8IUX7 1158 aa21.57■■□□□ 1.04
NUP50-209ENST00000432340 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
NUP50-209ENST00000432340 ALDH1B1P30837 517 aa21.56■■□□□ 1.04
NUP50-209ENST00000432340 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
NUP50-209ENST00000432340 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
NUP50-209ENST00000432340 AOC2O75106 756 aa21.55■■□□□ 1.04
NUP50-209ENST00000432340 NBPF5PQ86XG9 351 aaPredicted RBP21.55■■□□□ 1.04
NUP50-209ENST00000432340 TBC1D2BQ9UPU7 963 aa21.55■■□□□ 1.04
NUP50-209ENST00000432340 ADAMTSL1Q8N6G6 1762 aa21.55■■□□□ 1.04
NUP50-209ENST00000432340 GRIPAP1Q4V328 841 aa21.54■■□□□ 1.04
NUP50-209ENST00000432340 CST9Q5W186 159 aa21.54■■□□□ 1.04
NUP50-209ENST00000432340 CC2D2BQ6DHV5 1058 aa21.54■■□□□ 1.04
NUP50-209ENST00000432340 SAPCD2Q86UD0 394 aa21.54■■□□□ 1.04
NUP50-209ENST00000432340 GJA3Q9Y6H8 435 aa21.54■■□□□ 1.04
NUP50-209ENST00000432340 NOGQ13253 232 aa21.53■■□□□ 1.04
NUP50-209ENST00000432340 SYNE4Q8N205 404 aa21.53■■□□□ 1.04
NUP50-209ENST00000432340 PSMD1Q99460 953 aa21.53■■□□□ 1.04
NUP50-209ENST00000432340 ZNF652Q9Y2D9 606 aa21.53■■□□□ 1.04
NUP50-209ENST00000432340 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
NUP50-209ENST00000432340 CLEC4GQ6UXB4 293 aa21.51■■□□□ 1.03
NUP50-209ENST00000432340 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
NUP50-209ENST00000432340 MRC1P22897 1456 aa21.51■■□□□ 1.03
NUP50-209ENST00000432340 KLRG2A4D1S0 409 aaPredicted RBP21.5■■□□□ 1.03
NUP50-209ENST00000432340 CAMTA2O94983 1202 aa21.49■■□□□ 1.03
NUP50-209ENST00000432340 CELF2O95319 508 aaKnown RBP21.49■■□□□ 1.03
NUP50-209ENST00000432340 SOX10P56693 466 aa21.49■■□□□ 1.03
NUP50-209ENST00000432340 TRAF5O00463 557 aa21.48■■□□□ 1.03
NUP50-209ENST00000432340 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
NUP50-209ENST00000432340 NBPF15Q8N660 670 aa21.48■■□□□ 1.03
NUP50-209ENST00000432340 EPS15P42566 896 aa21.47■■□□□ 1.03
NUP50-209ENST00000432340 SCNN1DP51172 638 aa21.47■■□□□ 1.03
NUP50-209ENST00000432340 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
NUP50-209ENST00000432340 ADARB2Q9NS39 739 aaKnown RBP21.47■■□□□ 1.03
NUP50-209ENST00000432340 SAGE1Q9NXZ1 904 aa21.47■■□□□ 1.03
NUP50-209ENST00000432340 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
NUP50-209ENST00000432340 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
NUP50-209ENST00000432340 RGL2O15211 777 aa21.46■■□□□ 1.03
NUP50-209ENST00000432340 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
NUP50-209ENST00000432340 FMR1Q06787 632 aaKnown RBP eCLIP21.45■■□□□ 1.02
NUP50-209ENST00000432340 LARGE2Q8N3Y3 721 aa21.45■■□□□ 1.02
NUP50-209ENST00000432340 HEG1Q9ULI3 1381 aa21.45■■□□□ 1.02
NUP50-209ENST00000432340 LTBP1Q14766 1721 aa21.44■■□□□ 1.02
NUP50-209ENST00000432340 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
NUP50-209ENST00000432340 IL13P35225 146 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 TEFQ10587 303 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 ZNF790Q6PG37 636 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 MORC1Q86VD1 984 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 NIM1KQ8IY84 436 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
NUP50-209ENST00000432340 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
NUP50-209ENST00000432340 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
NUP50-209ENST00000432340 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
NUP50-209ENST00000432340 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
NUP50-209ENST00000432340 SCN7AQ01118 1682 aa21.41■■□□□ 1.02
NUP50-209ENST00000432340 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
NUP50-209ENST00000432340 CDC37L1Q7L3B6 337 aa21.4■■□□□ 1.02
NUP50-209ENST00000432340 GPRC5DQ9NZD1 345 aa21.4■■□□□ 1.02
NUP50-209ENST00000432340 ARFGEF2Q9Y6D5 1785 aa21.39■■□□□ 1.01
NUP50-209ENST00000432340 ZNF408Q9H9D4 720 aa21.39■■□□□ 1.01
NUP50-209ENST00000432340 CDHR2Q9BYE9 1310 aa21.38■■□□□ 1.01
NUP50-209ENST00000432340 A1BGP04217 495 aa21.38■■□□□ 1.01
NUP50-209ENST00000432340 CTU1Q7Z7A3 348 aaKnown RBP21.38■■□□□ 1.01
NUP50-209ENST00000432340 CCDC102AQ96A19 550 aa21.38■■□□□ 1.01
NUP50-209ENST00000432340 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
NUP50-209ENST00000432340 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
NUP50-209ENST00000432340 NIP7Q9Y221 180 aaKnown RBP eCLIP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms