RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
NCBP2-205ENST00000428425 CHMLP26374 656 aa17■□□□□ 0.31
NCBP2-205ENST00000428425 ESYT1Q9BSJ8 1104 aa17■□□□□ 0.31
NCBP2-205ENST00000428425 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
NCBP2-205ENST00000428425 K7ELQ4 463 aaPredicted RBP16.99■□□□□ 0.31
NCBP2-205ENST00000428425 IL2RBP14784 551 aa16.99■□□□□ 0.31
NCBP2-205ENST00000428425 CARD10Q9BWT7 1032 aa16.99■□□□□ 0.31
NCBP2-205ENST00000428425 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
NCBP2-205ENST00000428425 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
NCBP2-205ENST00000428425 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
NCBP2-205ENST00000428425 REC8O95072 547 aa16.98■□□□□ 0.31
NCBP2-205ENST00000428425 GCKRQ14397 625 aa16.98■□□□□ 0.31
NCBP2-205ENST00000428425 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
NCBP2-205ENST00000428425 METTL22Q9BUU2 404 aaPredicted RBP16.98■□□□□ 0.31
NCBP2-205ENST00000428425 AOX1Q06278 1338 aa16.98■□□□□ 0.31
NCBP2-205ENST00000428425 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 RABEP1Q15276 862 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
NCBP2-205ENST00000428425 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
NCBP2-205ENST00000428425 EVA1CP58658 441 aa16.96■□□□□ 0.31
NCBP2-205ENST00000428425 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
NCBP2-205ENST00000428425 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.31
NCBP2-205ENST00000428425 UBR2Q8IWV8 1755 aa16.96■□□□□ 0.31
NCBP2-205ENST00000428425 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.31
NCBP2-205ENST00000428425 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.3
NCBP2-205ENST00000428425 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.3
NCBP2-205ENST00000428425 GSE1Q14687 1217 aa16.96■□□□□ 0.3
NCBP2-205ENST00000428425 PALD1Q9ULE6 856 aa16.96■□□□□ 0.3
NCBP2-205ENST00000428425 NEXNQ0ZGT2 675 aa16.95■□□□□ 0.3
NCBP2-205ENST00000428425 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
NCBP2-205ENST00000428425 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
NCBP2-205ENST00000428425 SASH1O94885 1247 aa16.94■□□□□ 0.3
NCBP2-205ENST00000428425 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
NCBP2-205ENST00000428425 SIL1Q9H173 461 aa16.94■□□□□ 0.3
NCBP2-205ENST00000428425 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
NCBP2-205ENST00000428425 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
NCBP2-205ENST00000428425 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
NCBP2-205ENST00000428425 PAPPAQ13219 1627 aa16.94■□□□□ 0.3
NCBP2-205ENST00000428425 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
NCBP2-205ENST00000428425 A1BGP04217 495 aa16.93■□□□□ 0.3
NCBP2-205ENST00000428425 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
NCBP2-205ENST00000428425 AHDC1Q5TGY3 1603 aaPredicted RBP16.93■□□□□ 0.3
NCBP2-205ENST00000428425 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
NCBP2-205ENST00000428425 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
NCBP2-205ENST00000428425 JCADQ9P266 1359 aa16.92■□□□□ 0.3
NCBP2-205ENST00000428425 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
NCBP2-205ENST00000428425 MCM4P33991 863 aa16.92■□□□□ 0.3
NCBP2-205ENST00000428425 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
NCBP2-205ENST00000428425 CLASRPQ8N2M8 674 aaKnown RBP16.92■□□□□ 0.3
NCBP2-205ENST00000428425 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
NCBP2-205ENST00000428425 AACSQ86V21 672 aa16.91■□□□□ 0.3
NCBP2-205ENST00000428425 EAF2Q96CJ1 260 aaPredicted RBP16.91■□□□□ 0.3
NCBP2-205ENST00000428425 TNPO1Q92973 898 aaKnown RBP16.9■□□□□ 0.3
NCBP2-205ENST00000428425 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
NCBP2-205ENST00000428425 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
NCBP2-205ENST00000428425 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
NCBP2-205ENST00000428425 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
NCBP2-205ENST00000428425 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
NCBP2-205ENST00000428425 A0A087WZG4 1122 aa16.89■□□□□ 0.29
NCBP2-205ENST00000428425 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
NCBP2-205ENST00000428425 CASP7P55210 303 aa16.89■□□□□ 0.29
NCBP2-205ENST00000428425 G3BP1Q13283 466 aaKnown RBP eCLIP16.89■□□□□ 0.29
NCBP2-205ENST00000428425 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
NCBP2-205ENST00000428425 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
NCBP2-205ENST00000428425 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
NCBP2-205ENST00000428425 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 NUP188Q5SRE5 1749 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
NCBP2-205ENST00000428425 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
NCBP2-205ENST00000428425 CNTROBQ8N137 903 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 SGSM2O43147 1006 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
NCBP2-205ENST00000428425 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
NCBP2-205ENST00000428425 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
NCBP2-205ENST00000428425 NEK4P51957 841 aa16.87■□□□□ 0.29
NCBP2-205ENST00000428425 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
NCBP2-205ENST00000428425 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
NCBP2-205ENST00000428425 ST18O60284 1047 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 SSFA2P28290 1259 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
NCBP2-205ENST00000428425 PIGBQ92521 554 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
NCBP2-205ENST00000428425 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
NCBP2-205ENST00000428425 TJP1Q07157 1748 aa16.86■□□□□ 0.29
NCBP2-205ENST00000428425 PKP1Q13835 747 aa16.85■□□□□ 0.29
NCBP2-205ENST00000428425 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
NCBP2-205ENST00000428425 LSG1Q9H089 658 aaKnown RBP16.85■□□□□ 0.29
NCBP2-205ENST00000428425 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
NCBP2-205ENST00000428425 COPRSQ9NQ92 184 aa16.84■□□□□ 0.29
NCBP2-205ENST00000428425 HSPA4P34932 840 aa16.84■□□□□ 0.29
NCBP2-205ENST00000428425 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
NCBP2-205ENST00000428425 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
NCBP2-205ENST00000428425 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
NCBP2-205ENST00000428425 RAD50Q92878 1312 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms