RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
RBFOX1-204ENST00000422070 EIF5BO60841 1220 aaKnown RBP23.34■■□□□ 1.33
RBFOX1-204ENST00000422070 TBC1D32Q96NH3 1257 aa23.34■■□□□ 1.33
RBFOX1-204ENST00000422070 BCL9LQ86UU0 1499 aa23.33■■□□□ 1.33
RBFOX1-204ENST00000422070 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
RBFOX1-204ENST00000422070 GSPT1P15170 499 aaKnown RBP23.33■■□□□ 1.33
RBFOX1-204ENST00000422070 MYD88Q99836 296 aa23.33■■□□□ 1.33
RBFOX1-204ENST00000422070 C16orf71Q8IYS4 520 aaPredicted RBP23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 CICQ96RK0 1608 aaPredicted RBP23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 AFDNP55196 1824 aaKnown RBP23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 VPS72Q15906 364 aa23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 CERKQ8TCT0 537 aa23.32■■□□□ 1.32
RBFOX1-204ENST00000422070 PIP4K2AP48426 406 aaPredicted RBP23.31■■□□□ 1.32
RBFOX1-204ENST00000422070 STARD3NLO95772 234 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 A1BGP04217 495 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 OTUD7AQ8TE49 926 aaPredicted RBP23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 KIF1BPQ96EK5 621 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 KAZALD1Q96I82 304 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 SUCLG2Q96I99 432 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 AOX1Q06278 1338 aa23.3■■□□□ 1.32
RBFOX1-204ENST00000422070 APBB1O00213 710 aa23.29■■□□□ 1.32
RBFOX1-204ENST00000422070 CDC45O75419 566 aa23.29■■□□□ 1.32
RBFOX1-204ENST00000422070 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
RBFOX1-204ENST00000422070 PDE1AP54750 535 aa23.29■■□□□ 1.32
RBFOX1-204ENST00000422070 STAP2Q9UGK3 403 aa23.28■■□□□ 1.32
RBFOX1-204ENST00000422070 TJP1Q07157 1748 aa23.28■■□□□ 1.32
RBFOX1-204ENST00000422070 DNAJC10Q8IXB1 793 aa23.28■■□□□ 1.32
RBFOX1-204ENST00000422070 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
RBFOX1-204ENST00000422070 MARCH10Q8NA82 808 aaPredicted RBP23.27■■□□□ 1.32
RBFOX1-204ENST00000422070 RHPN1Q8TCX5 695 aa23.27■■□□□ 1.32
RBFOX1-204ENST00000422070 BICC1Q9H694 974 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-204ENST00000422070 TBC1D9Q6ZT07 1266 aa23.26■■□□□ 1.31
RBFOX1-204ENST00000422070 TTLL7Q6ZT98 887 aa23.26■■□□□ 1.31
RBFOX1-204ENST00000422070 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
RBFOX1-204ENST00000422070 MX1P20591 662 aa23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 NGLY1Q96IV0 654 aa23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-204ENST00000422070 CASP7P55210 303 aa23.24■■□□□ 1.31
RBFOX1-204ENST00000422070 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
RBFOX1-204ENST00000422070 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
RBFOX1-204ENST00000422070 C22orf23Q9BZE7 217 aa23.24■■□□□ 1.31
RBFOX1-204ENST00000422070 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
RBFOX1-204ENST00000422070 SDSP20132 328 aa23.23■■□□□ 1.31
RBFOX1-204ENST00000422070 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
RBFOX1-204ENST00000422070 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
RBFOX1-204ENST00000422070 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 RREB1Q92766 1687 aa23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 A0A087WZG4 1122 aa23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 H7C1W4 665 aa23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 RBM25P49756 843 aaKnown RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 CWC25Q9NXE8 425 aaPredicted RBP23.22■■□□□ 1.31
RBFOX1-204ENST00000422070 ATP5J2-PTCD1G3V325 749 aa23.2■■□□□ 1.3
RBFOX1-204ENST00000422070 KIF6Q6ZMV9 814 aa23.2■■□□□ 1.3
RBFOX1-204ENST00000422070 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
RBFOX1-204ENST00000422070 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
RBFOX1-204ENST00000422070 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 UBE3BQ7Z3V4 1068 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 IL1RAPL2Q9NP60 686 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 COPRSQ9NQ92 184 aa23.19■■□□□ 1.3
RBFOX1-204ENST00000422070 MAP3K15Q6ZN16 1313 aa23.18■■□□□ 1.3
RBFOX1-204ENST00000422070 TTC41PQ6P2S7 1318 aa23.18■■□□□ 1.3
RBFOX1-204ENST00000422070 IL6STP40189 918 aaPredicted RBP23.17■■□□□ 1.3
RBFOX1-204ENST00000422070 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
RBFOX1-204ENST00000422070 FAM98CQ17RN3 349 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-204ENST00000422070 CLASRPQ8N2M8 674 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-204ENST00000422070 USP21Q9UK80 565 aa23.17■■□□□ 1.3
RBFOX1-204ENST00000422070 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
RBFOX1-204ENST00000422070 RFX5P48382 616 aaPredicted RBP23.16■■□□□ 1.3
RBFOX1-204ENST00000422070 HSP90AB3PQ58FF7 597 aa23.16■■□□□ 1.3
RBFOX1-204ENST00000422070 ANKRD36CQ5JPF3 1778 aa23.15■■□□□ 1.3
RBFOX1-204ENST00000422070 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.3
RBFOX1-204ENST00000422070 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
RBFOX1-204ENST00000422070 PA2G4Q9UQ80 394 aaKnown RBP23.15■■□□□ 1.3
RBFOX1-204ENST00000422070 ZBTB1Q9Y2K1 713 aa23.15■■□□□ 1.3
RBFOX1-204ENST00000422070 BECN1Q14457 450 aa23.14■■□□□ 1.29
RBFOX1-204ENST00000422070 BCL11AQ9H165 835 aa23.14■■□□□ 1.29
RBFOX1-204ENST00000422070 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
RBFOX1-204ENST00000422070 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 DAXXQ9UER7 740 aaPredicted RBP23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 SASH1O94885 1247 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 SIK1P57059 783 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 FOXO4P98177 505 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 ACSBG1Q96GR2 724 aa23.13■■□□□ 1.29
RBFOX1-204ENST00000422070 HSPA1LP34931 641 aa23.12■■□□□ 1.29
RBFOX1-204ENST00000422070 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
RBFOX1-204ENST00000422070 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms