RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 USP21Q9UK80 565 aa16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
TMEM50B-201ENST00000420455 GRM8O00222 908 aa16.67■□□□□ 0.26
TMEM50B-201ENST00000420455 A1BGP04217 495 aa16.67■□□□□ 0.26
TMEM50B-201ENST00000420455 GCKRQ14397 625 aa16.67■□□□□ 0.26
TMEM50B-201ENST00000420455 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
TMEM50B-201ENST00000420455 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
TMEM50B-201ENST00000420455 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
TMEM50B-201ENST00000420455 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
TMEM50B-201ENST00000420455 DNAJC10Q8IXB1 793 aa16.66■□□□□ 0.26
TMEM50B-201ENST00000420455 SALL3Q9BXA9 1300 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 STARD3NLO95772 234 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 CASP7P55210 303 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
TMEM50B-201ENST00000420455 SBF2Q86WG5 1849 aa16.64■□□□□ 0.26
TMEM50B-201ENST00000420455 PPP1R42Q7Z4L9 355 aa16.64■□□□□ 0.25
TMEM50B-201ENST00000420455 MYD88Q99836 296 aa16.64■□□□□ 0.25
TMEM50B-201ENST00000420455 OSBPL3Q9H4L5 887 aa16.64■□□□□ 0.25
TMEM50B-201ENST00000420455 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
TMEM50B-201ENST00000420455 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
TMEM50B-201ENST00000420455 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
TMEM50B-201ENST00000420455 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
TMEM50B-201ENST00000420455 GJD4Q96KN9 370 aaPredicted RBP16.63■□□□□ 0.25
TMEM50B-201ENST00000420455 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
TMEM50B-201ENST00000420455 AFF2P51816 1311 aa16.62■□□□□ 0.25
TMEM50B-201ENST00000420455 BTAF1O14981 1849 aa16.62■□□□□ 0.25
TMEM50B-201ENST00000420455 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
TMEM50B-201ENST00000420455 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 LY75O60449 1722 aa16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 H7C1W4 665 aa16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
TMEM50B-201ENST00000420455 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
TMEM50B-201ENST00000420455 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
TMEM50B-201ENST00000420455 NUP98P52948 1817 aa16.6■□□□□ 0.25
TMEM50B-201ENST00000420455 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 MYH14Q7Z406 1995 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 SYTL4Q96C24 671 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
TMEM50B-201ENST00000420455 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 GSPT1P15170 499 aaKnown RBP16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 SIK1P57059 783 aa16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 TCIRG1Q13488 830 aa16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 TTC22Q5TAA0 569 aa16.58■□□□□ 0.24
TMEM50B-201ENST00000420455 KCNQ2O43526 872 aa16.57■□□□□ 0.24
TMEM50B-201ENST00000420455 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
TMEM50B-201ENST00000420455 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
TMEM50B-201ENST00000420455 AOX1Q06278 1338 aa16.57■□□□□ 0.24
TMEM50B-201ENST00000420455 ERVV-1B6SEH8 477 aa16.57■□□□□ 0.24
TMEM50B-201ENST00000420455 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 ZBTB1Q9Y2K1 713 aa16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 ITPK1Q13572 414 aa16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
TMEM50B-201ENST00000420455 FOXO4P98177 505 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 DDRGK1Q96HY6 314 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 ATP5J2-PTCD1G3V325 749 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 PDE1AP54750 535 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 RHPN1Q8TCX5 695 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
TMEM50B-201ENST00000420455 A0A087WZG4 1122 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 SLC4A3P48751 1232 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
TMEM50B-201ENST00000420455 BRWD3Q6RI45 1802 aa16.53■□□□□ 0.24
TMEM50B-201ENST00000420455 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
TMEM50B-201ENST00000420455 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
TMEM50B-201ENST00000420455 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
TMEM50B-201ENST00000420455 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms