RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
LMO2-203ENST00000411482 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
LMO2-203ENST00000411482 ALDH1L1O75891 902 aa23.94■■□□□ 1.42
LMO2-203ENST00000411482 CABP4P57796 275 aa23.94■■□□□ 1.42
LMO2-203ENST00000411482 TXNRD1Q16881 649 aa23.94■■□□□ 1.42
LMO2-203ENST00000411482 UBTFL1P0CB47 393 aaPredicted RBP23.93■■□□□ 1.42
LMO2-203ENST00000411482 ATG3Q9NT62 314 aa23.93■■□□□ 1.42
LMO2-203ENST00000411482 NUP188Q5SRE5 1749 aa23.93■■□□□ 1.42
LMO2-203ENST00000411482 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
LMO2-203ENST00000411482 PROSER3Q2NL68 480 aa23.92■■□□□ 1.42
LMO2-203ENST00000411482 SSH3Q8TE77 659 aa23.92■■□□□ 1.42
LMO2-203ENST00000411482 LRRC4BQ9NT99 713 aa23.92■■□□□ 1.42
LMO2-203ENST00000411482 SLC39A6Q13433 755 aa23.91■■□□□ 1.42
LMO2-203ENST00000411482 ZNF496Q96IT1 587 aaPredicted RBP23.91■■□□□ 1.42
LMO2-203ENST00000411482 OSBPL3Q9H4L5 887 aa23.91■■□□□ 1.42
LMO2-203ENST00000411482 LRRFIP2Q9Y608 721 aaKnown RBP23.91■■□□□ 1.42
LMO2-203ENST00000411482 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
LMO2-203ENST00000411482 ANXA1P04083 346 aa23.89■■□□□ 1.42
LMO2-203ENST00000411482 POLA2Q14181 598 aa23.89■■□□□ 1.42
LMO2-203ENST00000411482 C5P01031 1676 aa23.89■■□□□ 1.42
LMO2-203ENST00000411482 PNMA6EA0A0J9YXQ4 647 aa23.89■■□□□ 1.41
LMO2-203ENST00000411482 TTC22Q5TAA0 569 aa23.89■■□□□ 1.41
LMO2-203ENST00000411482 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
LMO2-203ENST00000411482 KCNQ4P56696 695 aa23.88■■□□□ 1.41
LMO2-203ENST00000411482 LRP10Q7Z4F1 713 aa23.88■■□□□ 1.41
LMO2-203ENST00000411482 SMARCC1Q92922 1105 aaPredicted RBP23.88■■□□□ 1.41
LMO2-203ENST00000411482 FMNL2Q96PY5 1086 aa23.88■■□□□ 1.41
LMO2-203ENST00000411482 UTYO14607 1347 aa23.87■■□□□ 1.41
LMO2-203ENST00000411482 SALL3Q9BXA9 1300 aa23.87■■□□□ 1.41
LMO2-203ENST00000411482 EIF5BO60841 1220 aaKnown RBP23.87■■□□□ 1.41
LMO2-203ENST00000411482 DDX58O95786 925 aaKnown RBP23.87■■□□□ 1.41
LMO2-203ENST00000411482 GSPT1P15170 499 aaKnown RBP23.87■■□□□ 1.41
LMO2-203ENST00000411482 MTX1Q13505 466 aa23.87■■□□□ 1.41
LMO2-203ENST00000411482 C16orf71Q8IYS4 520 aaPredicted RBP23.87■■□□□ 1.41
LMO2-203ENST00000411482 HDAC5Q9UQL6 1122 aa23.87■■□□□ 1.41
LMO2-203ENST00000411482 MAP3K2Q9Y2U5 619 aa23.87■■□□□ 1.41
LMO2-203ENST00000411482 TTC5Q8N0Z6 440 aa23.86■■□□□ 1.41
LMO2-203ENST00000411482 LINS1Q8NG48 757 aa23.86■■□□□ 1.41
LMO2-203ENST00000411482 C22orf23Q9BZE7 217 aa23.86■■□□□ 1.41
LMO2-203ENST00000411482 RBM25P49756 843 aaKnown RBP23.85■■□□□ 1.41
LMO2-203ENST00000411482 SLC27A3Q5K4L6 730 aa23.85■■□□□ 1.41
LMO2-203ENST00000411482 SLC4A9Q96Q91 983 aa23.85■■□□□ 1.41
LMO2-203ENST00000411482 PAPPAQ13219 1627 aa23.85■■□□□ 1.41
LMO2-203ENST00000411482 TAF1LQ8IZX4 1826 aa23.85■■□□□ 1.41
LMO2-203ENST00000411482 ERBB4Q15303 1308 aa23.85■■□□□ 1.41
LMO2-203ENST00000411482 NBPF7P0C2Y1 421 aaPredicted RBP23.84■■□□□ 1.41
LMO2-203ENST00000411482 SMARCA5O60264 1052 aaPredicted RBP23.84■■□□□ 1.41
LMO2-203ENST00000411482 RAB11FIP3O75154 756 aa23.84■■□□□ 1.41
LMO2-203ENST00000411482 CDC45O75419 566 aa23.84■■□□□ 1.41
LMO2-203ENST00000411482 TBC1D9Q6ZT07 1266 aa23.84■■□□□ 1.41
LMO2-203ENST00000411482 OTUD7AQ8TE49 926 aaPredicted RBP23.84■■□□□ 1.41
LMO2-203ENST00000411482 LRRCC1Q9C099 1032 aa23.84■■□□□ 1.41
LMO2-203ENST00000411482 LOC102724428A0A0B4J2F2 783 aa23.83■■□□□ 1.41
LMO2-203ENST00000411482 SIK1P57059 783 aa23.83■■□□□ 1.41
LMO2-203ENST00000411482 ANO8Q9HCE9 1232 aaPredicted RBP23.83■■□□□ 1.41
LMO2-203ENST00000411482 UBR2Q8IWV8 1755 aa23.82■■□□□ 1.4
LMO2-203ENST00000411482 MFAP1P55081 439 aaKnown RBP23.82■■□□□ 1.4
LMO2-203ENST00000411482 PPP1R42Q7Z4L9 355 aa23.82■■□□□ 1.4
LMO2-203ENST00000411482 CCNL1Q9UK58 526 aaPredicted RBP23.82■■□□□ 1.4
LMO2-203ENST00000411482 EXOC6BQ9Y2D4 811 aa23.82■■□□□ 1.4
LMO2-203ENST00000411482 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
LMO2-203ENST00000411482 ZNF831Q5JPB2 1677 aa23.81■■□□□ 1.4
LMO2-203ENST00000411482 BECN1Q14457 450 aa23.81■■□□□ 1.4
LMO2-203ENST00000411482 DAXXQ9UER7 740 aaPredicted RBP23.81■■□□□ 1.4
LMO2-203ENST00000411482 STAP2Q9UGK3 403 aa23.81■■□□□ 1.4
LMO2-203ENST00000411482 LAMB4A4D0S4 1761 aa23.81■■□□□ 1.4
LMO2-203ENST00000411482 PDE1AP54750 535 aa23.8■■□□□ 1.4
LMO2-203ENST00000411482 ITPK1Q13572 414 aa23.79■■□□□ 1.4
LMO2-203ENST00000411482 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
LMO2-203ENST00000411482 PTCD1O75127 700 aaKnown RBP23.79■■□□□ 1.4
LMO2-203ENST00000411482 AOX1Q06278 1338 aa23.78■■□□□ 1.4
LMO2-203ENST00000411482 XAGE3Q8WTP9 111 aa23.78■■□□□ 1.4
LMO2-203ENST00000411482 AKT1S1Q96B36 256 aa23.78■■□□□ 1.4
LMO2-203ENST00000411482 RBM42Q9BTD8 480 aaKnown RBP23.78■■□□□ 1.4
LMO2-203ENST00000411482 METTL22Q9BUU2 404 aaPredicted RBP23.78■■□□□ 1.4
LMO2-203ENST00000411482 GRM8O00222 908 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 IGKV5-2P06315 115 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 SDSP20132 328 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 ATP6V1AP38606 617 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 SLC4A3P48751 1232 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 ZNF827Q17R98 1081 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 HSP90AB4PQ58FF6 505 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 COPS6Q7L5N1 327 aa23.76■■□□□ 1.39
LMO2-203ENST00000411482 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
LMO2-203ENST00000411482 MYH14Q7Z406 1995 aaKnown RBP23.75■■□□□ 1.39
LMO2-203ENST00000411482 APBB1O00213 710 aa23.75■■□□□ 1.39
LMO2-203ENST00000411482 SRGAP3O43295 1099 aa23.75■■□□□ 1.39
LMO2-203ENST00000411482 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
LMO2-203ENST00000411482 COL15A1P39059 1388 aa23.75■■□□□ 1.39
LMO2-203ENST00000411482 SLC15A2Q16348 729 aa23.74■■□□□ 1.39
LMO2-203ENST00000411482 CWF19L2Q2TBE0 894 aaKnown RBP23.74■■□□□ 1.39
LMO2-203ENST00000411482 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
LMO2-203ENST00000411482 ANKRD13DQ6ZTN6 518 aa23.74■■□□□ 1.39
LMO2-203ENST00000411482 LINC00116Q8NCU8 138 aa23.74■■□□□ 1.39
LMO2-203ENST00000411482 TJP1Q07157 1748 aa23.74■■□□□ 1.39
LMO2-203ENST00000411482 CICQ96RK0 1608 aaPredicted RBP23.74■■□□□ 1.39
LMO2-203ENST00000411482 COL5A3P25940 1745 aaPredicted RBP23.74■■□□□ 1.39
LMO2-203ENST00000411482 R3HDM1Q15032 1099 aaKnown RBP23.74■■□□□ 1.39
LMO2-203ENST00000411482 TUBGCP6Q96RT7 1819 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 PSDA5PKW4 1024 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms