RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ABCC1P33527 1531 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 ADH1AP07327 375 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
LSM5-203ENST00000409782 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
LSM5-203ENST00000409782 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 EFCAB2Q5VUJ9 269 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
LSM5-203ENST00000409782 SCAPERQ9BY12 1400 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 KDM5CP41229 1560 aa9.36□□□□□ -0.91
LSM5-203ENST00000409782 ZNF518AQ6AHZ1 1483 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 LOC105371045A0A1W2PR82 267 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 ZNF16P17020 682 aaPredicted RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 SERPINB4P48594 390 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 RELBQ01201 579 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 ZNF787Q6DD87 383 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 KIAA1522Q9P206 1035 aaPredicted RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 GMPR2Q9P2T1 348 aaKnown RBP9.35□□□□□ -0.91
LSM5-203ENST00000409782 CDC42BPBQ9Y5S2 1711 aa9.35□□□□□ -0.91
LSM5-203ENST00000409782 CDC42BPAQ5VT25 1732 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 VAMP1P23763 118 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 SCTRP47872 440 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 SEC13P55735 322 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 OCLNQ16625 522 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
LSM5-203ENST00000409782 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
LSM5-203ENST00000409782 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
LSM5-203ENST00000409782 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
LSM5-203ENST00000409782 HECW2Q9P2P5 1572 aa9.33□□□□□ -0.92
LSM5-203ENST00000409782 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 GPATCH8Q9UKJ3 1502 aaKnown RBP9.32□□□□□ -0.92
LSM5-203ENST00000409782 ZBTB7BO15156 539 aaPredicted RBP9.32□□□□□ -0.92
LSM5-203ENST00000409782 PTGIRP43119 386 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
LSM5-203ENST00000409782 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 TIAM1Q13009 1591 aa9.32□□□□□ -0.92
LSM5-203ENST00000409782 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 OSBPL3Q9H4L5 887 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
LSM5-203ENST00000409782 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 SAMD9LQ8IVG5 1584 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
LSM5-203ENST00000409782 REREQ9P2R6 1566 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 MLH3Q9UHC1 1453 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 POTECB2RU33 542 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 M0R2N6 131 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 SPINT1O43278 529 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 GTF2IP78347 998 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 RBM19Q9Y4C8 960 aaKnown RBP9.3□□□□□ -0.92
LSM5-203ENST00000409782 MAP3K1Q13233 1512 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 SYCP2Q9BX26 1530 aa9.3□□□□□ -0.92
LSM5-203ENST00000409782 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 ATP10AO60312 1499 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 SUPT6HQ7KZ85 1726 aaKnown RBP9.29□□□□□ -0.92
LSM5-203ENST00000409782 MAN1A2O60476 641 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 ICMTO60725 284 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 GNRH1P01148 92 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 BIN2Q9UBW5 565 aaPredicted RBP9.29□□□□□ -0.92
LSM5-203ENST00000409782 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 MADDQ8WXG6 1647 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 KIAA1107Q9UPP5 1409 aa9.29□□□□□ -0.92
LSM5-203ENST00000409782 ABCA6Q8N139 1617 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 ANKRD33BA6NCL7 494 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 MEN1O00255 615 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
LSM5-203ENST00000409782 NLRP3Q96P20 1036 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 INSM2Q96T92 566 aaPredicted RBP9.28□□□□□ -0.92
LSM5-203ENST00000409782 POLMQ9NP87 494 aaPredicted RBP9.28□□□□□ -0.92
LSM5-203ENST00000409782 TRAPPC8Q9Y2L5 1435 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 PTPRMP28827 1452 aa9.28□□□□□ -0.92
LSM5-203ENST00000409782 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
LSM5-203ENST00000409782 SNRPBP14678 240 aaKnown RBP9.27□□□□□ -0.93
LSM5-203ENST00000409782 ZNF326Q5BKZ1 582 aaKnown RBP9.27□□□□□ -0.93
LSM5-203ENST00000409782 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
LSM5-203ENST00000409782 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.93
LSM5-203ENST00000409782 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
LSM5-203ENST00000409782 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
LSM5-203ENST00000409782 NCOA2Q15596 1464 aa9.27□□□□□ -0.93
LSM5-203ENST00000409782 AGLP35573 1532 aa9.26□□□□□ -0.93
LSM5-203ENST00000409782 INO80Q9ULG1 1556 aaPredicted RBP9.26□□□□□ -0.93
LSM5-203ENST00000409782 C21orf2O43822 256 aa9.26□□□□□ -0.93
LSM5-203ENST00000409782 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
LSM5-203ENST00000409782 ESCO1Q5FWF5 840 aa9.26□□□□□ -0.93
LSM5-203ENST00000409782 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 550.3 ms