RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 KIF5BP33176 963 aa29.17■■■□□ 2.26
SPIRE1-202ENST00000409402 PEG3Q9GZU2 1588 aa29.17■■■□□ 2.26
SPIRE1-202ENST00000409402 MAP3K11Q16584 847 aa29.17■■■□□ 2.26
SPIRE1-202ENST00000409402 SNRKQ9NRH2 765 aa29.17■■■□□ 2.26
SPIRE1-202ENST00000409402 ANKRD18AQ8IVF6 992 aa29.17■■■□□ 2.26
SPIRE1-202ENST00000409402 AKAP4Q5JQC9 854 aa29.16■■■□□ 2.26
SPIRE1-202ENST00000409402 ZNF397Q8NF99 534 aaPredicted RBP29.16■■■□□ 2.26
SPIRE1-202ENST00000409402 NEFHP12036 1026 aa29.16■■■□□ 2.26
SPIRE1-202ENST00000409402 PLEKHH1Q9ULM0 1364 aa29.15■■■□□ 2.26
SPIRE1-202ENST00000409402 TSPY2A6NKD2 308 aa29.15■■■□□ 2.26
SPIRE1-202ENST00000409402 BAG4O95429 457 aaKnown RBP29.15■■■□□ 2.26
SPIRE1-202ENST00000409402 SCAND2PQ9GZW5 306 aaPredicted RBP29.15■■■□□ 2.26
SPIRE1-202ENST00000409402 CRNKL1Q9BZJ0 848 aaKnown RBP29.14■■■□□ 2.26
SPIRE1-202ENST00000409402 KAT14Q9H8E8 782 aa29.14■■■□□ 2.26
SPIRE1-202ENST00000409402 C19orf44Q9H6X5 657 aa29.14■■■□□ 2.26
SPIRE1-202ENST00000409402 C20orf194Q5TEA3 1177 aa29.13■■■□□ 2.25
SPIRE1-202ENST00000409402 IL2RBP14784 551 aa29.13■■■□□ 2.25
SPIRE1-202ENST00000409402 MFSD6Q6ZSS7 791 aa29.13■■■□□ 2.25
SPIRE1-202ENST00000409402 LIMCH1Q9UPQ0 1083 aa29.13■■■□□ 2.25
SPIRE1-202ENST00000409402 RALGAPBQ86X10 1494 aa29.13■■■□□ 2.25
SPIRE1-202ENST00000409402 NLRP3Q96P20 1036 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 CHPF2Q9P2E5 772 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 SYCP2Q9BX26 1530 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 ANXA1P04083 346 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 TMEM67Q5HYA8 995 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 XAGE3Q8WTP9 111 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 UBA5Q9GZZ9 404 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 GOLGA6L10A6NI86 522 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 ITSN2Q9NZM3 1697 aa29.12■■■□□ 2.25
SPIRE1-202ENST00000409402 HDAC9Q9UKV0 1011 aa29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 MYCNP04198 464 aaPredicted RBP29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 EPB41L2O43491 1005 aaKnown RBP29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 KIF20AO95235 890 aa29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 JARID2Q92833 1246 aaPredicted RBP29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 ZGPATQ8N5A5 531 aaKnown RBP29.11■■■□□ 2.25
SPIRE1-202ENST00000409402 SEPT7Q16181 437 aaKnown RBP29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 GUCY1B3Q02153 619 aa29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 IQCEQ6IPM2 695 aa29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 SSR1P43307 286 aaKnown RBP29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 CFAP100Q494V2 611 aa29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 FKBP15Q5T1M5 1219 aa29.1■■■□□ 2.25
SPIRE1-202ENST00000409402 FBLN1P23142 703 aa29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 KIAA1328Q86T90 577 aa29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 AXDND1Q5T1B0 1012 aaPredicted RBP29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 TAF4BQ92750 862 aa29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 FAM177A1Q8N128 213 aaPredicted RBP29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 COPS6Q7L5N1 327 aa29.09■■■□□ 2.25
SPIRE1-202ENST00000409402 FGFR1OPO95684 399 aaKnown RBP29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 CAMK4Q16566 473 aa29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 NYXQ9GZU5 481 aa29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 SLC39A6Q13433 755 aa29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 JAKMIP3Q5VZ66 844 aa29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 CCT2P78371 535 aaKnown RBP29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 NCOA7Q8NI08 942 aa29.08■■■□□ 2.25
SPIRE1-202ENST00000409402 NIP7Q9Y221 180 aaKnown RBP eCLIP29.07■■■□□ 2.24
SPIRE1-202ENST00000409402 MPHOSPH6Q99547 160 aaKnown RBP29.07■■■□□ 2.24
SPIRE1-202ENST00000409402 IARSP41252 1262 aaKnown RBP29.07■■■□□ 2.24
SPIRE1-202ENST00000409402 MCM4P33991 863 aa29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 UTP14AQ9BVJ6 771 aaKnown RBP29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 VAT1LQ9HCJ6 419 aa29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 CETN2P41208 172 aa29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 ZRSR2Q15696 482 aaKnown RBP29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 FILIP1Q7Z7B0 1213 aa29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 LRRC59Q96AG4 307 aaKnown RBP29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 CABLES1Q8TDN4 633 aa29.06■■■□□ 2.24
SPIRE1-202ENST00000409402 ANO10Q9NW15 660 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 NCKAP5LQ9HCH0 1330 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 CCDC150Q8NCX0 1101 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 HMG20BQ9P0W2 317 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 GRPEL1Q9HAV7 217 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 USP16Q9Y5T5 823 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 ALDH1L1O75891 902 aa29.05■■■□□ 2.24
SPIRE1-202ENST00000409402 KLHL10Q6JEL2 608 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 ARHGAP45Q92619 1136 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 NUP160Q12769 1436 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 HAND2P61296 217 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 ATP2B3Q16720 1220 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 OGFOD1Q8N543 542 aa29.04■■■□□ 2.24
SPIRE1-202ENST00000409402 CALML4Q96GE6 196 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 ZFYP08048 801 aaPredicted RBP29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 EIF4A2Q14240 407 aaKnown RBP29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 SLC4A8Q2Y0W8 1093 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 CCDC112Q8NEF3 446 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 CCDC178Q5BJE1 867 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 PPP4R3BQ5MIZ7 849 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 FLT4P35916 1363 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 HSPA2P54652 639 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 SIRT1Q96EB6 747 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 TCP11L1Q9NUJ3 509 aa29.03■■■□□ 2.24
SPIRE1-202ENST00000409402 ARHGAP29Q52LW3 1261 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 MTERF4Q7Z6M4 381 aaKnown RBP29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 RHPN1Q8TCX5 695 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 NEK1Q96PY6 1258 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 POLD1P28340 1107 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 METAP2P50579 478 aaKnown RBP eCLIP29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 KSR2Q6VAB6 950 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 RTCBQ9Y3I0 505 aaKnown RBP29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 ERLIN1O75477 346 aa29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 ZNF804AQ7Z570 1209 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms