RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 LINS1Q8NG48 757 aa35.85■■■■□ 3.33
CSNK1E-205ENST00000405675 RIC3Q7Z5B4 369 aa35.84■■■■□ 3.33
CSNK1E-205ENST00000405675 C9orf78Q9NZ63 289 aaPredicted RBP35.84■■■■□ 3.33
CSNK1E-205ENST00000405675 SRGAP3O43295 1099 aa35.83■■■■□ 3.33
CSNK1E-205ENST00000405675 CDC45O75419 566 aa35.83■■■■□ 3.33
CSNK1E-205ENST00000405675 IGKV5-2P06315 115 aa35.82■■■■□ 3.32
CSNK1E-205ENST00000405675 SALL3Q9BXA9 1300 aa35.81■■■■□ 3.32
CSNK1E-205ENST00000405675 PDE1AP54750 535 aa35.81■■■■□ 3.32
CSNK1E-205ENST00000405675 A0A0G2JS52 829 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 LAMB4A4D0S4 1761 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 MYT1Q01538 1121 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 DOT1LQ8TEK3 1739 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 KAT6BQ8WYB5 2073 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 ACSBG1Q96GR2 724 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 OSBPL3Q9H4L5 887 aa35.8■■■■□ 3.32
CSNK1E-205ENST00000405675 SDSP20132 328 aa35.79■■■■□ 3.32
CSNK1E-205ENST00000405675 SURF6O75683 361 aaKnown RBP35.78■■■■□ 3.32
CSNK1E-205ENST00000405675 GJD4Q96KN9 370 aaPredicted RBP35.78■■■■□ 3.32
CSNK1E-205ENST00000405675 UTYO14607 1347 aa35.77■■■■□ 3.32
CSNK1E-205ENST00000405675 GRM8O00222 908 aa35.77■■■■□ 3.32
CSNK1E-205ENST00000405675 TSHZ3Q63HK5 1081 aa35.77■■■■□ 3.32
CSNK1E-205ENST00000405675 ANKRD13DQ6ZTN6 518 aa35.77■■■■□ 3.32
CSNK1E-205ENST00000405675 METTL22Q9BUU2 404 aaPredicted RBP35.77■■■■□ 3.32
CSNK1E-205ENST00000405675 MTX1Q13505 466 aa35.76■■■■□ 3.32
CSNK1E-205ENST00000405675 NBPF26B4DH59 902 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 NBPF14Q5TI25 921 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 NBPF10Q6P3W6 841 aaKnown RBP35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 NBPF15Q8N660 670 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 MYD88Q99836 296 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 RBM42Q9BTD8 480 aaKnown RBP35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 KAZALD1Q96I82 304 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 SUCLG2Q96I99 432 aa35.75■■■■□ 3.31
CSNK1E-205ENST00000405675 NEURL1BA8MQ27 555 aa35.74■■■■□ 3.31
CSNK1E-205ENST00000405675 RBM25P49756 843 aaKnown RBP35.74■■■■□ 3.31
CSNK1E-205ENST00000405675 IL1RAPL2Q9NP60 686 aa35.74■■■■□ 3.31
CSNK1E-205ENST00000405675 RAB11FIP3O75154 756 aa35.74■■■■□ 3.31
CSNK1E-205ENST00000405675 A1BGP04217 495 aa35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 MX1P20591 662 aa35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 NEXNQ0ZGT2 675 aa35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 BECN1Q14457 450 aa35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 TRPC5Q9UL62 973 aaPredicted RBP35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 ATRNO75882 1429 aa35.72■■■■□ 3.31
CSNK1E-205ENST00000405675 VSIG10Q8N0Z9 540 aa35.71■■■■□ 3.31
CSNK1E-205ENST00000405675 RHPN1Q8TCX5 695 aa35.71■■■■□ 3.31
CSNK1E-205ENST00000405675 GCKRQ14397 625 aa35.7■■■■□ 3.31
CSNK1E-205ENST00000405675 DNAJC10Q8IXB1 793 aa35.7■■■■□ 3.31
CSNK1E-205ENST00000405675 NBR1Q14596 966 aa35.69■■■■□ 3.3
CSNK1E-205ENST00000405675 TBC1D2Q9BYX2 928 aa35.69■■■■□ 3.3
CSNK1E-205ENST00000405675 THSD7AQ9UPZ6 1657 aa35.69■■■■□ 3.3
CSNK1E-205ENST00000405675 ERBB4Q15303 1308 aa35.69■■■■□ 3.3
CSNK1E-205ENST00000405675 SLC4A9Q96Q91 983 aa35.69■■■■□ 3.3
CSNK1E-205ENST00000405675 STAP2Q9UGK3 403 aa35.68■■■■□ 3.3
CSNK1E-205ENST00000405675 HDAC5Q9UQL6 1122 aa35.68■■■■□ 3.3
CSNK1E-205ENST00000405675 KCNQ2O43526 872 aa35.68■■■■□ 3.3
CSNK1E-205ENST00000405675 BICC1Q9H694 974 aaKnown RBP35.68■■■■□ 3.3
CSNK1E-205ENST00000405675 QTRT2Q9H974 415 aaKnown RBP35.66■■■■□ 3.3
CSNK1E-205ENST00000405675 NUTM1Q86Y26 1132 aa35.66■■■■□ 3.3
CSNK1E-205ENST00000405675 KIF1BPQ96EK5 621 aa35.66■■■■□ 3.3
CSNK1E-205ENST00000405675 TEX13AQ9BXU3 409 aaPredicted RBP35.66■■■■□ 3.3
CSNK1E-205ENST00000405675 ARFGEF2Q9Y6D5 1785 aa35.66■■■■□ 3.3
CSNK1E-205ENST00000405675 PLBD2Q8NHP8 589 aa35.65■■■■□ 3.3
CSNK1E-205ENST00000405675 PA2G4Q9UQ80 394 aaKnown RBP35.65■■■■□ 3.3
CSNK1E-205ENST00000405675 TTLL7Q6ZT98 887 aa35.63■■■■□ 3.29
CSNK1E-205ENST00000405675 TUBGCP6Q96RT7 1819 aa35.63■■■■□ 3.29
CSNK1E-205ENST00000405675 ATP5J2-PTCD1G3V325 749 aa35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 ONECUT3O60422 494 aaPredicted RBP35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 HSP90AB4PQ58FF6 505 aa35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 JARID2Q92833 1246 aaPredicted RBP35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 KIF2CQ99661 725 aa35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 FAM182BQ5T319 152 aa35.62■■■■□ 3.29
CSNK1E-205ENST00000405675 EPHA10Q5JZY3 1008 aa35.61■■■■□ 3.29
CSNK1E-205ENST00000405675 STARD3NLO95772 234 aa35.6■■■■□ 3.29
CSNK1E-205ENST00000405675 OS9Q13438 667 aaPredicted RBP35.59■■■■□ 3.29
CSNK1E-205ENST00000405675 SEPT12Q8IYM1 358 aa35.59■■■■□ 3.29
CSNK1E-205ENST00000405675 AOX1Q06278 1338 aa35.58■■■■□ 3.29
CSNK1E-205ENST00000405675 AFDNP55196 1824 aaKnown RBP35.58■■■■□ 3.29
CSNK1E-205ENST00000405675 CASC1Q6TDU7 716 aa35.57■■■■□ 3.29
CSNK1E-205ENST00000405675 CYP19A1P11511 503 aaPredicted RBP35.57■■■■□ 3.28
CSNK1E-205ENST00000405675 PTF1AQ7RTS3 328 aa35.55■■■■□ 3.28
CSNK1E-205ENST00000405675 UBE3BQ7Z3V4 1068 aa35.54■■■■□ 3.28
CSNK1E-205ENST00000405675 USP26Q9BXU7 913 aa35.54■■■■□ 3.28
CSNK1E-205ENST00000405675 NUP188Q5SRE5 1749 aa35.54■■■■□ 3.28
CSNK1E-205ENST00000405675 PI4K2BQ8TCG2 481 aa35.54■■■■□ 3.28
CSNK1E-205ENST00000405675 ZNF330Q9Y3S2 320 aaPredicted RBP35.53■■■■□ 3.28
CSNK1E-205ENST00000405675 PALLDQ8WX93 1383 aa35.53■■■■□ 3.28
CSNK1E-205ENST00000405675 EIF5BO60841 1220 aaKnown RBP35.53■■■■□ 3.28
CSNK1E-205ENST00000405675 A0A087WZG4 1122 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 LOC102724428A0A0B4J2F2 783 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 TRIM6-TRIM34B2RNG4 842 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 CASP7P55210 303 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 SIK1P57059 783 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 RILPL2Q969X0 211 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 ZBTB3Q9H5J0 574 aa35.52■■■■□ 3.28
CSNK1E-205ENST00000405675 TJP1Q07157 1748 aa35.51■■■■□ 3.28
CSNK1E-205ENST00000405675 ATP6V1AP38606 617 aa35.51■■■■□ 3.27
CSNK1E-205ENST00000405675 ERC1Q8IUD2 1116 aa35.5■■■■□ 3.27
CSNK1E-205ENST00000405675 KLHDC4Q8TBB5 520 aa35.5■■■■□ 3.27
CSNK1E-205ENST00000405675 SMARCC1Q92922 1105 aaPredicted RBP35.5■■■■□ 3.27
CSNK1E-205ENST00000405675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.5■■■■□ 3.27
CSNK1E-205ENST00000405675 SASH1O94885 1247 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms