RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 JARID2Q92833 1246 aaPredicted RBP4.65□□□□□ -1.67
RTN4-208ENST00000404909 METTL22Q9BUU2 404 aaPredicted RBP4.65□□□□□ -1.67
RTN4-208ENST00000404909 IGKV5-2P06315 115 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 CRKLP46109 303 aaKnown RBP4.64□□□□□ -1.67
RTN4-208ENST00000404909 CEP85Q6P2H3 762 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 KIF6Q6ZMV9 814 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 FAM196AQ6ZSG2 479 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 TBC1D2BQ9UPU7 963 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 THSD7AQ9UPZ6 1657 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 UBR2Q8IWV8 1755 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 NEURL1BA8MQ27 555 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 ALDH1L1O75891 902 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 POTEAQ6S8J7 498 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 RPAP2Q8IXW5 612 aaPredicted RBP4.64□□□□□ -1.67
RTN4-208ENST00000404909 CCDC87Q9NVE4 849 aa4.64□□□□□ -1.67
RTN4-208ENST00000404909 RGS17Q9UGC6 210 aaPredicted RBP4.64□□□□□ -1.67
RTN4-208ENST00000404909 CCNL1Q9UK58 526 aaPredicted RBP4.64□□□□□ -1.67
RTN4-208ENST00000404909 PAPPAQ13219 1627 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 GRM8O00222 908 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 ANKRD45Q5TZF3 282 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 ANKRD44Q8N8A2 993 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 BCL11BQ9C0K0 894 aaPredicted RBP4.63□□□□□ -1.67
RTN4-208ENST00000404909 PDZRN3Q9UPQ7 1066 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 PXDNLA1KZ92 1463 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 A0A087WZG4 1122 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 HMMRO75330 724 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 GCKRQ14397 625 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 INTS5Q6P9B9 1019 aaKnown RBP4.63□□□□□ -1.67
RTN4-208ENST00000404909 SMIM5Q71RC9 77 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 UBE3BQ7Z3V4 1068 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 DZIP3Q86Y13 1208 aaKnown RBP4.63□□□□□ -1.67
RTN4-208ENST00000404909 LINC00116Q8NCU8 138 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 ATP10DQ9P241 1426 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 PNMA6EA0A0J9YXQ4 647 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 GPTP24298 496 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 IL6STP40189 918 aaPredicted RBP4.63□□□□□ -1.67
RTN4-208ENST00000404909 LNPKQ9C0E8 428 aa4.63□□□□□ -1.67
RTN4-208ENST00000404909 ZBTB47Q9UFB7 747 aaPredicted RBP4.63□□□□□ -1.67
RTN4-208ENST00000404909 SRGAP3O43295 1099 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 HLFQ16534 295 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 PPP1R42Q7Z4L9 355 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 MAP3K15Q6ZN16 1313 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 SMC5Q8IY18 1101 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 GCC1Q96CN9 775 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 CWC25Q9NXE8 425 aaPredicted RBP4.62□□□□□ -1.67
RTN4-208ENST00000404909 EXOC6BQ9Y2D4 811 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 LAMB4A4D0S4 1761 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 FAM177BA6PVY3 158 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 GNPATO15228 680 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 EIF5P55010 431 aaKnown RBP4.62□□□□□ -1.67
RTN4-208ENST00000404909 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 TCIRG1Q13488 830 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 BICC1Q9H694 974 aaKnown RBP4.62□□□□□ -1.67
RTN4-208ENST00000404909 DCTPP1Q9H773 170 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 HDAC5Q9UQL6 1122 aa4.62□□□□□ -1.67
RTN4-208ENST00000404909 PHF14O94880 888 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 GIGYF2Q6Y7W6 1299 aaKnown RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 CHMP3Q9Y3E7 222 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 SMARCA5O60264 1052 aaPredicted RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 SURF6O75683 361 aaKnown RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 APBA3O96018 575 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 NUCB1Q02818 461 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 CHD1LQ86WJ1 897 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 CCDC191Q8NCU4 936 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 FAM89AQ96GI7 184 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 OS9Q13438 667 aaPredicted RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 KAZALD1Q96I82 304 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 LRRC4BQ9NT99 713 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 BTAF1O14981 1849 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 COL15A1P39059 1388 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 HSP90AB3PQ58FF7 597 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 EPHA10Q5JZY3 1008 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 BICDL1Q6ZP65 573 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 AK7Q96M32 723 aa4.61□□□□□ -1.67
RTN4-208ENST00000404909 CCDC85AQ96PX6 553 aaPredicted RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 RTCBQ9Y3I0 505 aaKnown RBP4.61□□□□□ -1.67
RTN4-208ENST00000404909 BRWD3Q6RI45 1802 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 ERVV-1B6SEH8 477 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 SYNE4Q8N205 404 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 ISCA1Q9BUE6 129 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 SIL1Q9H173 461 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 TRMT112Q9UI30 125 aaKnown RBP4.6□□□□□ -1.67
RTN4-208ENST00000404909 PA2G4Q9UQ80 394 aaKnown RBP4.6□□□□□ -1.67
RTN4-208ENST00000404909 MYH14Q7Z406 1995 aaKnown RBP4.6□□□□□ -1.67
RTN4-208ENST00000404909 UTYO14607 1347 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 CNTNAP4Q9C0A0 1308 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 TJP1Q07157 1748 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 NHSQ6T4R5 1651 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 H7C1W4 665 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 ZPR1O75312 459 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 PDE4AP27815 886 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 LMBR1LQ6UX01 489 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 NLRP10Q86W26 655 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 AMIGO3Q86WK7 504 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
RTN4-208ENST00000404909 KLHDC4Q8TBB5 520 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 SSH3Q8TE77 659 aa4.6□□□□□ -1.67
RTN4-208ENST00000404909 NIP7Q9Y221 180 aaKnown RBP eCLIP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms