RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 SLC4A9Q96Q91 983 aa29■■■□□ 2.23
TRIOBP-203ENST00000403663 RBM42Q9BTD8 480 aaKnown RBP29■■■□□ 2.23
TRIOBP-203ENST00000403663 GAS2L3Q86XJ1 694 aa28.99■■■□□ 2.23
TRIOBP-203ENST00000403663 MYL6BP14649 208 aa28.99■■■□□ 2.23
TRIOBP-203ENST00000403663 HDAC1Q13547 482 aaPredicted RBP28.99■■■□□ 2.23
TRIOBP-203ENST00000403663 TRIM44Q96DX7 344 aaPredicted RBP28.98■■■□□ 2.23
TRIOBP-203ENST00000403663 TNPO1Q92973 898 aaKnown RBP28.98■■■□□ 2.23
TRIOBP-203ENST00000403663 DDX21Q9NR30 783 aaKnown RBP eCLIP28.98■■■□□ 2.23
TRIOBP-203ENST00000403663 SLC4A10Q6U841 1118 aa28.97■■■□□ 2.23
TRIOBP-203ENST00000403663 SNX21Q969T3 373 aa28.97■■■□□ 2.23
TRIOBP-203ENST00000403663 RBM25P49756 843 aaKnown RBP28.96■■■□□ 2.23
TRIOBP-203ENST00000403663 DDX19BQ9UMR2 479 aa28.96■■■□□ 2.23
TRIOBP-203ENST00000403663 SBF2Q86WG5 1849 aa28.96■■■□□ 2.23
TRIOBP-203ENST00000403663 ZNF772Q68DY9 489 aaPredicted RBP28.95■■■□□ 2.23
TRIOBP-203ENST00000403663 DNAJC10Q8IXB1 793 aa28.95■■■□□ 2.23
TRIOBP-203ENST00000403663 LRP10Q7Z4F1 713 aa28.95■■■□□ 2.22
TRIOBP-203ENST00000403663 SMC5Q8IY18 1101 aa28.95■■■□□ 2.22
TRIOBP-203ENST00000403663 NBPF26B4DH59 902 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 A1BGP04217 495 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 NBPF14Q5TI25 921 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 NBPF10Q6P3W6 841 aaKnown RBP28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 NBPF15Q8N660 670 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 INTS3Q68E01 1043 aaKnown RBP28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 CHMP4AQ9BY43 222 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 RGS17Q9UGC6 210 aaPredicted RBP28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 TJP1Q07157 1748 aa28.94■■■□□ 2.22
TRIOBP-203ENST00000403663 CIZ1Q9ULV3 898 aaPredicted RBP28.93■■■□□ 2.22
TRIOBP-203ENST00000403663 AIMP1Q12904 312 aaKnown RBP28.93■■■□□ 2.22
TRIOBP-203ENST00000403663 ADCY9O60503 1353 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 ZBTB7BO15156 539 aaPredicted RBP28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 BTAF1O14981 1849 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 PI4KAP2A4QPH2 592 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 PI4KAP1Q8N8J0 262 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 ZBTB40Q9NUA8 1239 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 NHSQ6T4R5 1651 aa28.92■■■□□ 2.22
TRIOBP-203ENST00000403663 GBP4Q96PP9 640 aa28.91■■■□□ 2.22
TRIOBP-203ENST00000403663 RAB3GAP1Q15042 981 aa28.91■■■□□ 2.22
TRIOBP-203ENST00000403663 TPM2P07951 284 aa28.9■■■□□ 2.22
TRIOBP-203ENST00000403663 RBM6P78332 1123 aaKnown RBP28.9■■■□□ 2.22
TRIOBP-203ENST00000403663 SKOR2Q2VWA4 1001 aaPredicted RBP28.9■■■□□ 2.22
TRIOBP-203ENST00000403663 N4BP2Q86UW6 1770 aaPredicted RBP28.9■■■□□ 2.22
TRIOBP-203ENST00000403663 XAGE3Q8WTP9 111 aa28.89■■■□□ 2.22
TRIOBP-203ENST00000403663 C1orf115Q9H7X2 142 aa28.88■■■□□ 2.21
TRIOBP-203ENST00000403663 PALLDQ8WX93 1383 aa28.88■■■□□ 2.21
TRIOBP-203ENST00000403663 COPS6Q7L5N1 327 aa28.88■■■□□ 2.21
TRIOBP-203ENST00000403663 MAP3K2Q9Y2U5 619 aa28.86■■■□□ 2.21
TRIOBP-203ENST00000403663 LOC102724428A0A0B4J2F2 783 aa28.85■■■□□ 2.21
TRIOBP-203ENST00000403663 PTMSP20962 102 aa28.85■■■□□ 2.21
TRIOBP-203ENST00000403663 SIK1P57059 783 aa28.85■■■□□ 2.21
TRIOBP-203ENST00000403663 DNAAF4Q8WXU2 420 aa28.85■■■□□ 2.21
TRIOBP-203ENST00000403663 MEIS3Q99687 375 aa28.85■■■□□ 2.21
TRIOBP-203ENST00000403663 CYP19A1P11511 503 aaPredicted RBP28.84■■■□□ 2.21
TRIOBP-203ENST00000403663 KCNQ4P56696 695 aa28.84■■■□□ 2.21
TRIOBP-203ENST00000403663 POTEAQ6S8J7 498 aa28.84■■■□□ 2.21
TRIOBP-203ENST00000403663 KRT27Q7Z3Y8 459 aa28.84■■■□□ 2.21
TRIOBP-203ENST00000403663 PXDNLA1KZ92 1463 aa28.84■■■□□ 2.21
TRIOBP-203ENST00000403663 CCT4P50991 539 aaKnown RBP28.83■■■□□ 2.21
TRIOBP-203ENST00000403663 ITPK1Q13572 414 aa28.83■■■□□ 2.21
TRIOBP-203ENST00000403663 KSR2Q6VAB6 950 aa28.83■■■□□ 2.21
TRIOBP-203ENST00000403663 ATP6V1AP38606 617 aa28.82■■■□□ 2.2
TRIOBP-203ENST00000403663 TEX13AQ9BXU3 409 aaPredicted RBP28.82■■■□□ 2.2
TRIOBP-203ENST00000403663 TTLL7Q6ZT98 887 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 ARFGEF2Q9Y6D5 1785 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 STARD3NLO95772 234 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 CCDC173Q0VFZ6 552 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 BEND3Q5T5X7 828 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 MYH14Q7Z406 1995 aaKnown RBP28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 PPP1R9BQ96SB3 815 aa28.81■■■□□ 2.2
TRIOBP-203ENST00000403663 RXRBP28702 533 aa28.8■■■□□ 2.2
TRIOBP-203ENST00000403663 KIF2CQ99661 725 aa28.8■■■□□ 2.2
TRIOBP-203ENST00000403663 NUCB1Q02818 461 aa28.8■■■□□ 2.2
TRIOBP-203ENST00000403663 ZNF330Q9Y3S2 320 aaPredicted RBP28.8■■■□□ 2.2
TRIOBP-203ENST00000403663 PDCL3Q9H2J4 239 aa28.79■■■□□ 2.2
TRIOBP-203ENST00000403663 ZBTB1Q9Y2K1 713 aa28.79■■■□□ 2.2
TRIOBP-203ENST00000403663 SMARCC1Q92922 1105 aaPredicted RBP28.78■■■□□ 2.2
TRIOBP-203ENST00000403663 KIAA1211Q6ZU35 1233 aa28.78■■■□□ 2.2
TRIOBP-203ENST00000403663 RIC3Q7Z5B4 369 aa28.78■■■□□ 2.2
TRIOBP-203ENST00000403663 ANKRD13DQ6ZTN6 518 aa28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 CICQ96RK0 1608 aaPredicted RBP28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 COL5A3P25940 1745 aaPredicted RBP28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 NUP188Q5SRE5 1749 aa28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 DDX58O95786 925 aaKnown RBP28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 CWF19L2Q2TBE0 894 aaKnown RBP28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 SRCIN1Q9C0H9 1055 aa28.77■■■□□ 2.2
TRIOBP-203ENST00000403663 CD2BP2O95400 341 aaKnown RBP28.76■■■□□ 2.2
TRIOBP-203ENST00000403663 USP44Q9H0E7 712 aa28.76■■■□□ 2.19
TRIOBP-203ENST00000403663 ATP10DQ9P241 1426 aa28.75■■■□□ 2.19
TRIOBP-203ENST00000403663 NASPP49321 788 aaPredicted RBP28.75■■■□□ 2.19
TRIOBP-203ENST00000403663 LNPKQ9C0E8 428 aa28.75■■■□□ 2.19
TRIOBP-203ENST00000403663 ZSCAN30Q86W11 494 aa28.75■■■□□ 2.19
TRIOBP-203ENST00000403663 LY75O60449 1722 aa28.74■■■□□ 2.19
TRIOBP-203ENST00000403663 INTS5Q6P9B9 1019 aaKnown RBP28.74■■■□□ 2.19
TRIOBP-203ENST00000403663 FAM196AQ6ZSG2 479 aa28.74■■■□□ 2.19
TRIOBP-203ENST00000403663 SIRT2Q8IXJ6 389 aa28.74■■■□□ 2.19
TRIOBP-203ENST00000403663 ZNF831Q5JPB2 1677 aa28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 TRIM37O94972 964 aa28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 IGKV5-2P06315 115 aa28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 CRKLP46109 303 aaKnown RBP28.73■■■□□ 2.19
TRIOBP-203ENST00000403663 CHD1LQ86WJ1 897 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms