RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PPP1R42Q7Z4L9 355 aa31.89■■■□□ 2.69
CPNE1-205ENST00000401607 THSD7AQ9UPZ6 1657 aa31.88■■■□□ 2.69
CPNE1-205ENST00000401607 MEX3CQ5U5Q3 659 aaKnown RBP31.88■■■□□ 2.69
CPNE1-205ENST00000401607 EXOC6BQ9Y2D4 811 aa31.87■■■□□ 2.69
CPNE1-205ENST00000401607 AFDNP55196 1824 aaKnown RBP31.87■■■□□ 2.69
CPNE1-205ENST00000401607 GCKRQ14397 625 aa31.86■■■□□ 2.69
CPNE1-205ENST00000401607 APBB1O00213 710 aa31.86■■■□□ 2.69
CPNE1-205ENST00000401607 SMARCA5O60264 1052 aaPredicted RBP31.86■■■□□ 2.69
CPNE1-205ENST00000401607 STARD3NLO95772 234 aa31.86■■■□□ 2.69
CPNE1-205ENST00000401607 MTX1Q13505 466 aa31.85■■■□□ 2.69
CPNE1-205ENST00000401607 SUCLG2Q96I99 432 aa31.84■■■□□ 2.69
CPNE1-205ENST00000401607 ZBTB47Q9UFB7 747 aaPredicted RBP31.84■■■□□ 2.69
CPNE1-205ENST00000401607 HDAC5Q9UQL6 1122 aa31.84■■■□□ 2.69
CPNE1-205ENST00000401607 SRGAP3O43295 1099 aa31.84■■■□□ 2.69
CPNE1-205ENST00000401607 C16orf71Q8IYS4 520 aaPredicted RBP31.84■■■□□ 2.69
CPNE1-205ENST00000401607 KAZALD1Q96I82 304 aa31.84■■■□□ 2.69
CPNE1-205ENST00000401607 AFF2P51816 1311 aa31.83■■■□□ 2.69
CPNE1-205ENST00000401607 CYP19A1P11511 503 aaPredicted RBP31.83■■■□□ 2.69
CPNE1-205ENST00000401607 PLEKHM2Q8IWE5 1019 aa31.83■■■□□ 2.69
CPNE1-205ENST00000401607 A0A0G2JS52 829 aa31.81■■■□□ 2.68
CPNE1-205ENST00000401607 ATP5J2-PTCD1G3V325 749 aa31.81■■■□□ 2.68
CPNE1-205ENST00000401607 BMP2KLQ5H9B9 411 aa31.8■■■□□ 2.68
CPNE1-205ENST00000401607 OTUD7AQ8TE49 926 aaPredicted RBP31.8■■■□□ 2.68
CPNE1-205ENST00000401607 ZBTB3Q9H5J0 574 aa31.79■■■□□ 2.68
CPNE1-205ENST00000401607 LRRCC1Q9C099 1032 aa31.79■■■□□ 2.68
CPNE1-205ENST00000401607 ATRNO75882 1429 aa31.78■■■□□ 2.68
CPNE1-205ENST00000401607 CICQ96RK0 1608 aaPredicted RBP31.78■■■□□ 2.68
CPNE1-205ENST00000401607 KCNQ2O43526 872 aa31.78■■■□□ 2.68
CPNE1-205ENST00000401607 SEC24BO95487 1268 aa31.78■■■□□ 2.68
CPNE1-205ENST00000401607 GJD4Q96KN9 370 aaPredicted RBP31.78■■■□□ 2.68
CPNE1-205ENST00000401607 MYT1Q01538 1121 aa31.77■■■□□ 2.68
CPNE1-205ENST00000401607 NPM2Q86SE8 214 aaKnown RBP31.77■■■□□ 2.68
CPNE1-205ENST00000401607 BICC1Q9H694 974 aaKnown RBP31.77■■■□□ 2.68
CPNE1-205ENST00000401607 BCL11AQ9H165 835 aa31.76■■■□□ 2.67
CPNE1-205ENST00000401607 SURF6O75683 361 aaKnown RBP31.75■■■□□ 2.67
CPNE1-205ENST00000401607 ANP32AP39687 249 aaKnown RBP31.75■■■□□ 2.67
CPNE1-205ENST00000401607 ZBTB1Q9Y2K1 713 aa31.75■■■□□ 2.67
CPNE1-205ENST00000401607 ZNF330Q9Y3S2 320 aaPredicted RBP31.75■■■□□ 2.67
CPNE1-205ENST00000401607 COL15A1P39059 1388 aa31.74■■■□□ 2.67
CPNE1-205ENST00000401607 PALLDQ8WX93 1383 aa31.74■■■□□ 2.67
CPNE1-205ENST00000401607 RAB11FIP3O75154 756 aa31.73■■■□□ 2.67
CPNE1-205ENST00000401607 CASP7P55210 303 aa31.73■■■□□ 2.67
CPNE1-205ENST00000401607 LOC102724428A0A0B4J2F2 783 aa31.73■■■□□ 2.67
CPNE1-205ENST00000401607 GSPT1P15170 499 aaKnown RBP31.73■■■□□ 2.67
CPNE1-205ENST00000401607 SIK1P57059 783 aa31.73■■■□□ 2.67
CPNE1-205ENST00000401607 NOP58Q9Y2X3 529 aaKnown RBP31.73■■■□□ 2.67
CPNE1-205ENST00000401607 A0A087WZG4 1122 aa31.72■■■□□ 2.67
CPNE1-205ENST00000401607 EPHA10Q5JZY3 1008 aa31.72■■■□□ 2.67
CPNE1-205ENST00000401607 JARID2Q92833 1246 aaPredicted RBP31.72■■■□□ 2.67
CPNE1-205ENST00000401607 SALL3Q9BXA9 1300 aa31.72■■■□□ 2.67
CPNE1-205ENST00000401607 UBE3BQ7Z3V4 1068 aa31.71■■■□□ 2.67
CPNE1-205ENST00000401607 TTC22Q5TAA0 569 aa31.71■■■□□ 2.67
CPNE1-205ENST00000401607 KIF6Q6ZMV9 814 aa31.71■■■□□ 2.67
CPNE1-205ENST00000401607 SMARCC1Q92922 1105 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-205ENST00000401607 CWC25Q9NXE8 425 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-205ENST00000401607 TRPC5Q9UL62 973 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-205ENST00000401607 RREB1Q92766 1687 aa31.7■■■□□ 2.67
CPNE1-205ENST00000401607 ATP6V1AP38606 617 aa31.7■■■□□ 2.67
CPNE1-205ENST00000401607 ISCA1Q9BUE6 129 aa31.7■■■□□ 2.67
CPNE1-205ENST00000401607 H7C1W4 665 aa31.69■■■□□ 2.66
CPNE1-205ENST00000401607 CCDC191Q8NCU4 936 aa31.69■■■□□ 2.66
CPNE1-205ENST00000401607 MAP3K15Q6ZN16 1313 aa31.69■■■□□ 2.66
CPNE1-205ENST00000401607 TCIRG1Q13488 830 aa31.68■■■□□ 2.66
CPNE1-205ENST00000401607 ITPK1Q13572 414 aa31.68■■■□□ 2.66
CPNE1-205ENST00000401607 RHPN1Q8TCX5 695 aa31.68■■■□□ 2.66
CPNE1-205ENST00000401607 OSBPL3Q9H4L5 887 aa31.68■■■□□ 2.66
CPNE1-205ENST00000401607 ONECUT3O60422 494 aaPredicted RBP31.68■■■□□ 2.66
CPNE1-205ENST00000401607 IL6STP40189 918 aaPredicted RBP31.68■■■□□ 2.66
CPNE1-205ENST00000401607 HSP90AB4PQ58FF6 505 aa31.68■■■□□ 2.66
CPNE1-205ENST00000401607 ZNF831Q5JPB2 1677 aa31.67■■■□□ 2.66
CPNE1-205ENST00000401607 INTS5Q6P9B9 1019 aaKnown RBP31.67■■■□□ 2.66
CPNE1-205ENST00000401607 NHSQ6T4R5 1651 aa31.67■■■□□ 2.66
CPNE1-205ENST00000401607 PDE1AP54750 535 aa31.66■■■□□ 2.66
CPNE1-205ENST00000401607 RABL6Q3YEC7 729 aaPredicted RBP31.66■■■□□ 2.66
CPNE1-205ENST00000401607 KIF1BPQ96EK5 621 aa31.66■■■□□ 2.66
CPNE1-205ENST00000401607 PA2G4Q9UQ80 394 aaKnown RBP31.66■■■□□ 2.66
CPNE1-205ENST00000401607 IL1RAPL2Q9NP60 686 aa31.66■■■□□ 2.66
CPNE1-205ENST00000401607 PTF1AQ7RTS3 328 aa31.65■■■□□ 2.66
CPNE1-205ENST00000401607 CCDC87Q9NVE4 849 aa31.65■■■□□ 2.66
CPNE1-205ENST00000401607 COL5A3P25940 1745 aaPredicted RBP31.64■■■□□ 2.66
CPNE1-205ENST00000401607 CRKLP46109 303 aaKnown RBP31.63■■■□□ 2.65
CPNE1-205ENST00000401607 TRIM28Q13263 835 aaKnown RBP31.63■■■□□ 2.65
CPNE1-205ENST00000401607 GIGYF2Q6Y7W6 1299 aaKnown RBP31.63■■■□□ 2.65
CPNE1-205ENST00000401607 HLFQ16534 295 aa31.63■■■□□ 2.65
CPNE1-205ENST00000401607 BTAF1O14981 1849 aa31.62■■■□□ 2.65
CPNE1-205ENST00000401607 EIF5P55010 431 aaKnown RBP31.62■■■□□ 2.65
CPNE1-205ENST00000401607 FAM182BQ5T319 152 aa31.62■■■□□ 2.65
CPNE1-205ENST00000401607 ARXQ96QS3 562 aa31.62■■■□□ 2.65
CPNE1-205ENST00000401607 ANKRD36CQ5JPF3 1778 aa31.61■■■□□ 2.65
CPNE1-205ENST00000401607 MX1P20591 662 aa31.61■■■□□ 2.65
CPNE1-205ENST00000401607 MYH14Q7Z406 1995 aaKnown RBP31.61■■■□□ 2.65
CPNE1-205ENST00000401607 FOXO4P98177 505 aa31.61■■■□□ 2.65
CPNE1-205ENST00000401607 STAP2Q9UGK3 403 aa31.61■■■□□ 2.65
CPNE1-205ENST00000401607 OS9Q13438 667 aaPredicted RBP31.6■■■□□ 2.65
CPNE1-205ENST00000401607 SEPT12Q8IYM1 358 aa31.6■■■□□ 2.65
CPNE1-205ENST00000401607 IPO9Q96P70 1041 aaKnown RBP31.6■■■□□ 2.65
CPNE1-205ENST00000401607 QTRT2Q9H974 415 aaKnown RBP31.6■■■□□ 2.65
CPNE1-205ENST00000401607 TUBGCP6Q96RT7 1819 aa31.6■■■□□ 2.65
CPNE1-205ENST00000401607 MSH5O43196 834 aa31.59■■■□□ 2.65
CPNE1-205ENST00000401607 RFX5P48382 616 aaPredicted RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms