RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 CEP85Q6P2H3 762 aa19.54■□□□□ 0.72
NPRL3-201ENST00000399953 LIG1P18858 919 aa19.53■□□□□ 0.72
NPRL3-201ENST00000399953 CCDC91Q7Z6B0 441 aa19.53■□□□□ 0.72
NPRL3-201ENST00000399953 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
NPRL3-201ENST00000399953 LMAN1P49257 510 aa19.53■□□□□ 0.72
NPRL3-201ENST00000399953 CAVIN2O95810 425 aa19.52■□□□□ 0.72
NPRL3-201ENST00000399953 RBM43Q6ZSC3 357 aaKnown RBP19.52■□□□□ 0.72
NPRL3-201ENST00000399953 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
NPRL3-201ENST00000399953 MTMR6Q9Y217 621 aa19.52■□□□□ 0.72
NPRL3-201ENST00000399953 CHMP3Q9Y3E7 222 aa19.52■□□□□ 0.72
NPRL3-201ENST00000399953 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.72
NPRL3-201ENST00000399953 EP400NLQ6ZTU2 488 aa19.52■□□□□ 0.72
NPRL3-201ENST00000399953 SEC31AO94979 1220 aaKnown RBP19.51■□□□□ 0.71
NPRL3-201ENST00000399953 TUBB4AP04350 444 aa19.51■□□□□ 0.71
NPRL3-201ENST00000399953 LEKR1Q6ZMV7 388 aa19.51■□□□□ 0.71
NPRL3-201ENST00000399953 DNAJC25Q9H1X3 360 aa19.51■□□□□ 0.71
NPRL3-201ENST00000399953 DDX19AQ9NUU7 478 aaKnown RBP19.51■□□□□ 0.71
NPRL3-201ENST00000399953 TPM1P09493 284 aa19.51■□□□□ 0.71
NPRL3-201ENST00000399953 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
NPRL3-201ENST00000399953 GOLGA6L19H0YKK7 550 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 CHMLP26374 656 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 SUGP1Q8IWZ8 645 aaKnown RBP19.5■□□□□ 0.71
NPRL3-201ENST00000399953 DACT1Q9NYF0 836 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 ADAM21Q9UKJ8 722 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
NPRL3-201ENST00000399953 TUBGCP6Q96RT7 1819 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 SASH3O75995 380 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 CNPY4Q8N129 248 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 PPM1EQ8WY54 764 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 CARD10Q9BWT7 1032 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 DONSONQ9NYP3 566 aa19.5■□□□□ 0.71
NPRL3-201ENST00000399953 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
NPRL3-201ENST00000399953 KRT85P78386 507 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 LIMCH1Q9UPQ0 1083 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 FANCAO15360 1455 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 SWT1Q5T5J6 900 aaKnown RBP19.49■□□□□ 0.71
NPRL3-201ENST00000399953 CLSTN2Q9H4D0 955 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 CXorf56Q9H5V9 222 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
NPRL3-201ENST00000399953 HSPA4P34932 840 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 CCDC158Q5M9N0 1113 aa19.49■□□□□ 0.71
NPRL3-201ENST00000399953 GSCP56915 257 aaPredicted RBP19.48■□□□□ 0.71
NPRL3-201ENST00000399953 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
NPRL3-201ENST00000399953 MNS1Q8NEH6 495 aa19.48■□□□□ 0.71
NPRL3-201ENST00000399953 PPP1R13BQ96KQ4 1090 aa19.48■□□□□ 0.71
NPRL3-201ENST00000399953 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
NPRL3-201ENST00000399953 EIF3CLB5ME19 914 aaKnown RBP19.47■□□□□ 0.71
NPRL3-201ENST00000399953 GJB2P29033 226 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 GSDMDP57764 484 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 TTC14Q96N46 770 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 EIF3CQ99613 913 aaKnown RBP19.47■□□□□ 0.71
NPRL3-201ENST00000399953 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 AK2P54819 239 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 CC2D1AQ6P1N0 951 aaPredicted RBP19.47■□□□□ 0.71
NPRL3-201ENST00000399953 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
NPRL3-201ENST00000399953 SRRTQ9BXP5 876 aaKnown RBP19.47■□□□□ 0.71
NPRL3-201ENST00000399953 KIF1CO43896 1103 aaKnown RBP19.46■□□□□ 0.71
NPRL3-201ENST00000399953 GNAI1P63096 354 aa19.46■□□□□ 0.71
NPRL3-201ENST00000399953 MCTP2Q6DN12 878 aa19.46■□□□□ 0.71
NPRL3-201ENST00000399953 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
NPRL3-201ENST00000399953 PSDA5PKW4 1024 aaPredicted RBP19.46■□□□□ 0.71
NPRL3-201ENST00000399953 GOLGA6L4A6NEF3 574 aa19.46■□□□□ 0.71
NPRL3-201ENST00000399953 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
NPRL3-201ENST00000399953 EFCAB8A8MWE9 144 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 TADA3O75528 432 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 GORABQ5T7V8 394 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 E4F1Q66K89 784 aaPredicted RBP19.45■□□□□ 0.7
NPRL3-201ENST00000399953 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 ADGRF5Q8IZF2 1346 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 HMMRO75330 724 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 IQCB1Q15051 598 aa19.45■□□□□ 0.7
NPRL3-201ENST00000399953 E2F4Q16254 413 aa19.44■□□□□ 0.7
NPRL3-201ENST00000399953 RILPL2Q969X0 211 aa19.44■□□□□ 0.7
NPRL3-201ENST00000399953 RPS6KA5O75582 802 aa19.44■□□□□ 0.7
NPRL3-201ENST00000399953 PHLPP2Q6ZVD8 1323 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
NPRL3-201ENST00000399953 CORO7P57737 925 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 MMS22LQ6ZRQ5 1243 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 CEP89Q96ST8 783 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 PLCH2O75038 1416 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 TSHZ3Q63HK5 1081 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 ARFGAP3Q9NP61 516 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 MBIPQ9NS73 344 aa19.43■□□□□ 0.7
NPRL3-201ENST00000399953 AFAP1Q8N556 730 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 LARP6Q9BRS8 491 aaKnown RBP19.42■□□□□ 0.7
NPRL3-201ENST00000399953 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 FCHSD2O94868 740 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 CPP00450 1065 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 KCNJ6P48051 423 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 SATB1Q01826 763 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 MED4Q9NPJ6 270 aa19.42■□□□□ 0.7
NPRL3-201ENST00000399953 SALL3Q9BXA9 1300 aa19.41■□□□□ 0.7
NPRL3-201ENST00000399953 CCDC83Q8IWF9 413 aa19.41■□□□□ 0.7
NPRL3-201ENST00000399953 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
NPRL3-201ENST00000399953 SCAND2PQ9GZW5 306 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms