RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LARP1Q6PKG0 1096 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 SH3BP5O60239 455 aa12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-216ENST00000399638 CSPG5O95196 566 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 TAF4BQ92750 862 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 PHACTR2O75167 634 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 HECW1Q76N89 1606 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 DNA2P51530 1060 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 SP4Q02446 784 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
CACNA1C-216ENST00000399638 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 BCAR3O75815 825 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 CNGA1P29973 690 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TRAK2O60296 914 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 HOOK3Q86VS8 718 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TRIM5Q9C035 493 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 SEPT6Q14141 434 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 TSNARE1Q96NA8 513 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
CACNA1C-216ENST00000399638 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 PDCP20941 246 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 CPLX3Q8WVH0 158 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CACNA1C-216ENST00000399638 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 ZNF397Q8NF99 534 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 NEK4P51957 841 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 PDE4BQ07343 736 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 CCDC194A0A1B0GVG4 234 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 ESPNB1AK53 854 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 FCHSD2O94868 740 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 EYA3Q99504 573 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 IL1RAPL2Q9NP60 686 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
CACNA1C-216ENST00000399638 NFE2L2Q16236 605 aa12.65□□□□□ -0.39
CACNA1C-216ENST00000399638 NYXQ9GZU5 481 aa12.65□□□□□ -0.39
CACNA1C-216ENST00000399638 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 FIBPO43427 364 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 RABEP1Q15276 862 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 STXBP4Q6ZWJ1 553 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 CETN1Q12798 172 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 ATP2C2O75185 946 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1C-216ENST00000399638 CLCN1P35523 988 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 FERP16591 822 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 MCM4P33991 863 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-216ENST00000399638 NACA2Q9H009 215 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms