RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GLRX3O76003 335 aaKnown RBP9.32□□□□□ -0.92
USP47-203ENST00000399455 KAT14Q9H8E8 782 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 HMGB1P09429 215 aaKnown RBP9.32□□□□□ -0.92
USP47-203ENST00000399455 KIF22Q14807 665 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
USP47-203ENST00000399455 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 RABEP1Q15276 862 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 CFAP43Q8NDM7 1665 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 RBM26Q5T8P6 1007 aaKnown RBP9.32□□□□□ -0.92
USP47-203ENST00000399455 SH2D4AQ9H788 454 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
USP47-203ENST00000399455 HSP90AA2PQ14568 343 aaPredicted RBP9.31□□□□□ -0.92
USP47-203ENST00000399455 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
USP47-203ENST00000399455 MAST3O60307 1309 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
USP47-203ENST00000399455 ZNF213O14771 459 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 PDRG1Q9NUG6 133 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
USP47-203ENST00000399455 NCBP1Q09161 790 aaKnown RBP9.3□□□□□ -0.92
USP47-203ENST00000399455 TSG101Q99816 390 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 DHX8Q14562 1220 aaKnown RBP9.3□□□□□ -0.92
USP47-203ENST00000399455 STXBP4Q6ZWJ1 553 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 ADGBQ8N7X0 1667 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 ZFYVE9O95405 1425 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 MAP3K9P80192 1104 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
USP47-203ENST00000399455 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 PLS1Q14651 629 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 PDILTQ8N807 584 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
USP47-203ENST00000399455 KIF20AO95235 890 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 PDE4AP27815 886 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 STK3Q13188 491 aa9.3□□□□□ -0.92
USP47-203ENST00000399455 GCP02774 474 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 PARP10Q53GL7 1025 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 RUFY1Q96T51 708 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 PIK3C2GO75747 1445 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 TSPY2A6NKD2 308 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 TSPY3P0CV98 308 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 TSPY8P0CW00 308 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 SSRP1Q08945 709 aaKnown RBP9.29□□□□□ -0.92
USP47-203ENST00000399455 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
USP47-203ENST00000399455 APBB1IPQ7Z5R6 666 aaPredicted RBP9.29□□□□□ -0.92
USP47-203ENST00000399455 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
USP47-203ENST00000399455 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 KDM5CP41229 1560 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 CAGE1Q8TC20 777 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 ZNF408Q9H9D4 720 aa9.29□□□□□ -0.92
USP47-203ENST00000399455 MAGI2Q86UL8 1455 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 CCP110O43303 1012 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 IP6K1Q92551 441 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 EAPPQ56P03 285 aaPredicted RBP9.28□□□□□ -0.92
USP47-203ENST00000399455 MAP3K5Q99683 1374 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 NEK4P51957 841 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 CHD1LQ86WJ1 897 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 FLIIQ13045 1269 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 PTPRKQ15262 1439 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 PICALMQ13492 652 aa9.28□□□□□ -0.92
USP47-203ENST00000399455 MAPKBP1O60336 1514 aa9.27□□□□□ -0.92
USP47-203ENST00000399455 RIMBP2O15034 1052 aa9.27□□□□□ -0.92
USP47-203ENST00000399455 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.92
USP47-203ENST00000399455 FGFR1OPO95684 399 aaKnown RBP9.27□□□□□ -0.93
USP47-203ENST00000399455 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
USP47-203ENST00000399455 IL1RAPL2Q9NP60 686 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 ERLIN2O94905 339 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 UBE3BQ7Z3V4 1068 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
USP47-203ENST00000399455 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
USP47-203ENST00000399455 CFAP45Q9UL16 551 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 SAMM50Q9Y512 469 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 H7C1D1 291 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 MFSD6Q6ZSS7 791 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 CERS3Q8IU89 383 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 CCDC194A0A1B0GVG4 234 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 MX1P20591 662 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 NLRP5P59047 1200 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 DEF6Q9H4E7 631 aa9.27□□□□□ -0.93
USP47-203ENST00000399455 KIF4AO95239 1232 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 SLC5A4Q9NY91 659 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 IFIT3O14879 490 aaKnown RBP9.26□□□□□ -0.93
USP47-203ENST00000399455 RFX1P22670 979 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 NAA16Q6N069 864 aaPredicted RBP9.26□□□□□ -0.93
USP47-203ENST00000399455 LRRC27Q9C0I9 530 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 BOLA2Q9H3K6 86 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 PDZRN3Q9UPQ7 1066 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 LPXNO60711 386 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 CETN2P41208 172 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 EVI5LQ96CN4 794 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms