RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
ITSN1-207ENST00000399338 BORCS6Q96GS4 357 aa12.98□□□□□ -0.33
ITSN1-207ENST00000399338 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
ITSN1-207ENST00000399338 A0A087WUV0 522 aaPredicted RBP12.97□□□□□ -0.33
ITSN1-207ENST00000399338 TPM1P09493 284 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 SCP2P22307 547 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 TACO1Q9BSH4 297 aaKnown RBP12.97□□□□□ -0.33
ITSN1-207ENST00000399338 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 SMC2O95347 1197 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 SARM1Q6SZW1 724 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
ITSN1-207ENST00000399338 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
ITSN1-207ENST00000399338 SGSM2O43147 1006 aa12.96□□□□□ -0.33
ITSN1-207ENST00000399338 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
ITSN1-207ENST00000399338 KAT2BQ92831 832 aa12.96□□□□□ -0.33
ITSN1-207ENST00000399338 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
ITSN1-207ENST00000399338 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
ITSN1-207ENST00000399338 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.34
ITSN1-207ENST00000399338 ANKRD65E5RJM6 399 aa12.96□□□□□ -0.34
ITSN1-207ENST00000399338 F13A1P00488 732 aa12.96□□□□□ -0.34
ITSN1-207ENST00000399338 TUBB4AP04350 444 aa12.96□□□□□ -0.34
ITSN1-207ENST00000399338 ZKSCAN8Q15776 578 aaPredicted RBP12.96□□□□□ -0.34
ITSN1-207ENST00000399338 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.34
ITSN1-207ENST00000399338 SRRTQ9BXP5 876 aaKnown RBP12.96□□□□□ -0.34
ITSN1-207ENST00000399338 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 MIEF2Q96C03 454 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 MNAT1P51948 309 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 PLEKHO1Q53GL0 409 aaPredicted RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 LRRC31Q6UY01 552 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 ARID3CA6NKF2 412 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
ITSN1-207ENST00000399338 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 ATP6V1DQ9Y5K8 247 aa12.95□□□□□ -0.34
ITSN1-207ENST00000399338 MAP2K7O14733 419 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 STX6O43752 255 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 ANAPC15P60006 121 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
ITSN1-207ENST00000399338 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
ITSN1-207ENST00000399338 MICALL1Q8N3F8 863 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
ITSN1-207ENST00000399338 TTC21BQ7Z4L5 1316 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 MSH6P52701 1360 aa12.94□□□□□ -0.34
ITSN1-207ENST00000399338 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 ANKRD33BA6NCL7 494 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 SYT1P21579 422 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
ITSN1-207ENST00000399338 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 ARHGEF5Q12774 1597 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
ITSN1-207ENST00000399338 EIF5P55010 431 aaKnown RBP12.93□□□□□ -0.34
ITSN1-207ENST00000399338 CAMK4Q16566 473 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 TTLL5Q6EMB2 1281 aa12.93□□□□□ -0.34
ITSN1-207ENST00000399338 IL16Q14005 1332 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 ZNF165P49910 485 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 DNM1Q05193 864 aaKnown RBP12.92□□□□□ -0.34
ITSN1-207ENST00000399338 GPR161Q8N6U8 529 aaKnown RBP12.92□□□□□ -0.34
ITSN1-207ENST00000399338 VPS18Q9P253 973 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
ITSN1-207ENST00000399338 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 TTC36A6NLP5 189 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 ERC1Q8IUD2 1116 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 ITFG2Q969R8 447 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
ITSN1-207ENST00000399338 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 PTCH1Q13635 1447 aa12.92□□□□□ -0.34
ITSN1-207ENST00000399338 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 LIG1P18858 919 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 USP8P40818 1118 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 CD109Q6YHK3 1445 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
ITSN1-207ENST00000399338 H0YHG0 523 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 PPFIA4O75335 1185 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 ERLIN2O94905 339 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 EVCP57679 992 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 SARNPP82979 210 aaKnown RBP12.91□□□□□ -0.34
ITSN1-207ENST00000399338 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-207ENST00000399338 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-207ENST00000399338 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
ITSN1-207ENST00000399338 KCNJ6P48051 423 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms