RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CRKLP46109 303 aaKnown RBP17.09■□□□□ 0.33
MCF2L-209ENST00000397036 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-209ENST00000397036 TRIM28Q13263 835 aaKnown RBP17.09■□□□□ 0.33
MCF2L-209ENST00000397036 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
MCF2L-209ENST00000397036 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
MCF2L-209ENST00000397036 ERVV-1B6SEH8 477 aa17.08■□□□□ 0.32
MCF2L-209ENST00000397036 RGL2O15211 777 aa17.08■□□□□ 0.32
MCF2L-209ENST00000397036 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.32
MCF2L-209ENST00000397036 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-209ENST00000397036 SBF2Q86WG5 1849 aa17.08■□□□□ 0.32
MCF2L-209ENST00000397036 TJP1Q07157 1748 aa17.07■□□□□ 0.32
MCF2L-209ENST00000397036 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
MCF2L-209ENST00000397036 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
MCF2L-209ENST00000397036 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-209ENST00000397036 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
MCF2L-209ENST00000397036 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 BTAF1O14981 1849 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 GCKRQ14397 625 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 SLC27A3Q5K4L6 730 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
MCF2L-209ENST00000397036 SIRT2Q8IXJ6 389 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
MCF2L-209ENST00000397036 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
MCF2L-209ENST00000397036 COL15A1P39059 1388 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 GRM8O00222 908 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 PLSCR1O15162 318 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 MYD88Q99836 296 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
MCF2L-209ENST00000397036 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-209ENST00000397036 RREB1Q92766 1687 aa17.04■□□□□ 0.32
MCF2L-209ENST00000397036 A0A087WZG4 1122 aa17.04■□□□□ 0.32
MCF2L-209ENST00000397036 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
MCF2L-209ENST00000397036 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
MCF2L-209ENST00000397036 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
MCF2L-209ENST00000397036 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-209ENST00000397036 HMMRO75330 724 aa17.03■□□□□ 0.32
MCF2L-209ENST00000397036 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
MCF2L-209ENST00000397036 TRIM37O94972 964 aa17.03■□□□□ 0.32
MCF2L-209ENST00000397036 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
MCF2L-209ENST00000397036 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-209ENST00000397036 MTX1Q13505 466 aa17.02■□□□□ 0.32
MCF2L-209ENST00000397036 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
MCF2L-209ENST00000397036 H7C1W4 665 aa17.01■□□□□ 0.31
MCF2L-209ENST00000397036 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
MCF2L-209ENST00000397036 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
MCF2L-209ENST00000397036 LY75O60449 1722 aa17.01■□□□□ 0.31
MCF2L-209ENST00000397036 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
MCF2L-209ENST00000397036 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-209ENST00000397036 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
MCF2L-209ENST00000397036 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
MCF2L-209ENST00000397036 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-209ENST00000397036 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
MCF2L-209ENST00000397036 CASP7P55210 303 aa16.99■□□□□ 0.31
MCF2L-209ENST00000397036 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
MCF2L-209ENST00000397036 ZNF330Q9Y3S2 320 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-209ENST00000397036 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
MCF2L-209ENST00000397036 POLA2Q14181 598 aa16.98■□□□□ 0.31
MCF2L-209ENST00000397036 ZNF34Q8IZ26 560 aa16.98■□□□□ 0.31
MCF2L-209ENST00000397036 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
MCF2L-209ENST00000397036 ARFGEF2Q9Y6D5 1785 aa16.98■□□□□ 0.31
MCF2L-209ENST00000397036 ADRA2BP18089 450 aa16.97■□□□□ 0.31
MCF2L-209ENST00000397036 HLFQ16534 295 aa16.97■□□□□ 0.31
MCF2L-209ENST00000397036 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
MCF2L-209ENST00000397036 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
MCF2L-209ENST00000397036 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
MCF2L-209ENST00000397036 TXNRD1Q16881 649 aa16.96■□□□□ 0.31
MCF2L-209ENST00000397036 PROM2Q8N271 834 aa16.96■□□□□ 0.31
MCF2L-209ENST00000397036 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
MCF2L-209ENST00000397036 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
MCF2L-209ENST00000397036 PCCAP05165 728 aaPredicted RBP16.96■□□□□ 0.3
MCF2L-209ENST00000397036 KCNQ4P56696 695 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 NUCB1Q02818 461 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.3
MCF2L-209ENST00000397036 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 NLRP10Q86W26 655 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.3
MCF2L-209ENST00000397036 SUCLG2Q96I99 432 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 NARFQ9UHQ1 456 aa16.96■□□□□ 0.3
MCF2L-209ENST00000397036 APBA3O96018 575 aa16.95■□□□□ 0.3
MCF2L-209ENST00000397036 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
MCF2L-209ENST00000397036 ARXQ96QS3 562 aa16.95■□□□□ 0.3
MCF2L-209ENST00000397036 PLA2G12BQ9BX93 195 aa16.95■□□□□ 0.3
MCF2L-209ENST00000397036 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
MCF2L-209ENST00000397036 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
MCF2L-209ENST00000397036 GNPATO15228 680 aa16.94■□□□□ 0.3
MCF2L-209ENST00000397036 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-209ENST00000397036 NOP58Q9Y2X3 529 aaKnown RBP16.94■□□□□ 0.3
MCF2L-209ENST00000397036 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
MCF2L-209ENST00000397036 AK7Q96M32 723 aa16.93■□□□□ 0.3
MCF2L-209ENST00000397036 CDHR2Q9BYE9 1310 aa16.93■□□□□ 0.3
MCF2L-209ENST00000397036 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms