RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 PPP1R42Q7Z4L9 355 aa24.49■■□□□ 1.51
RAB5C-202ENST00000393860 C16orf71Q8IYS4 520 aaPredicted RBP24.48■■□□□ 1.51
RAB5C-202ENST00000393860 VSIG10Q8N0Z9 540 aa24.48■■□□□ 1.51
RAB5C-202ENST00000393860 AFF2P51816 1311 aa24.47■■□□□ 1.51
RAB5C-202ENST00000393860 ATP5J2-PTCD1G3V325 749 aa24.47■■□□□ 1.51
RAB5C-202ENST00000393860 GRM8O00222 908 aa24.47■■□□□ 1.51
RAB5C-202ENST00000393860 PLBD2Q8NHP8 589 aa24.47■■□□□ 1.51
RAB5C-202ENST00000393860 ZBTB47Q9UFB7 747 aaPredicted RBP24.47■■□□□ 1.51
RAB5C-202ENST00000393860 NUP188Q5SRE5 1749 aa24.47■■□□□ 1.51
RAB5C-202ENST00000393860 TJP1Q07157 1748 aa24.46■■□□□ 1.51
RAB5C-202ENST00000393860 JARID2Q92833 1246 aaPredicted RBP24.46■■□□□ 1.51
RAB5C-202ENST00000393860 ZBTB3Q9H5J0 574 aa24.46■■□□□ 1.51
RAB5C-202ENST00000393860 SRGAP3O43295 1099 aa24.45■■□□□ 1.51
RAB5C-202ENST00000393860 KCNQ2O43526 872 aa24.45■■□□□ 1.51
RAB5C-202ENST00000393860 OTUD7AQ8TE49 926 aaPredicted RBP24.45■■□□□ 1.51
RAB5C-202ENST00000393860 SUCLG2Q96I99 432 aa24.45■■□□□ 1.51
RAB5C-202ENST00000393860 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.51
RAB5C-202ENST00000393860 GCKRQ14397 625 aa24.45■■□□□ 1.5
RAB5C-202ENST00000393860 SSH3Q8TE77 659 aa24.45■■□□□ 1.5
RAB5C-202ENST00000393860 STARD3NLO95772 234 aa24.44■■□□□ 1.5
RAB5C-202ENST00000393860 THSD7AQ9UPZ6 1657 aa24.43■■□□□ 1.5
RAB5C-202ENST00000393860 UTYO14607 1347 aa24.42■■□□□ 1.5
RAB5C-202ENST00000393860 SEC24BO95487 1268 aa24.42■■□□□ 1.5
RAB5C-202ENST00000393860 CYP19A1P11511 503 aaPredicted RBP24.42■■□□□ 1.5
RAB5C-202ENST00000393860 POLA2Q14181 598 aa24.42■■□□□ 1.5
RAB5C-202ENST00000393860 PLEKHM2Q8IWE5 1019 aa24.41■■□□□ 1.5
RAB5C-202ENST00000393860 KAZALD1Q96I82 304 aa24.41■■□□□ 1.5
RAB5C-202ENST00000393860 ARXQ96QS3 562 aa24.41■■□□□ 1.5
RAB5C-202ENST00000393860 FAM182BQ5T319 152 aa24.41■■□□□ 1.5
RAB5C-202ENST00000393860 BICC1Q9H694 974 aaKnown RBP24.41■■□□□ 1.5
RAB5C-202ENST00000393860 IBTKQ9P2D0 1353 aaPredicted RBP24.41■■□□□ 1.5
RAB5C-202ENST00000393860 ZBTB1Q9Y2K1 713 aa24.4■■□□□ 1.5
RAB5C-202ENST00000393860 SURF6O75683 361 aaKnown RBP24.39■■□□□ 1.5
RAB5C-202ENST00000393860 GJD4Q96KN9 370 aaPredicted RBP24.39■■□□□ 1.5
RAB5C-202ENST00000393860 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
RAB5C-202ENST00000393860 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
RAB5C-202ENST00000393860 ANP32AP39687 249 aaKnown RBP24.37■■□□□ 1.49
RAB5C-202ENST00000393860 UBE3BQ7Z3V4 1068 aa24.37■■□□□ 1.49
RAB5C-202ENST00000393860 A0A087WZG4 1122 aa24.37■■□□□ 1.49
RAB5C-202ENST00000393860 ATP6V1AP38606 617 aa24.37■■□□□ 1.49
RAB5C-202ENST00000393860 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
RAB5C-202ENST00000393860 PTF1AQ7RTS3 328 aa24.37■■□□□ 1.49
RAB5C-202ENST00000393860 MTX1Q13505 466 aa24.36■■□□□ 1.49
RAB5C-202ENST00000393860 RTL5Q5HYW3 569 aaPredicted RBP24.36■■□□□ 1.49
RAB5C-202ENST00000393860 KIF6Q6ZMV9 814 aa24.36■■□□□ 1.49
RAB5C-202ENST00000393860 HDAC5Q9UQL6 1122 aa24.36■■□□□ 1.49
RAB5C-202ENST00000393860 ATRNO75882 1429 aa24.36■■□□□ 1.49
RAB5C-202ENST00000393860 LOC102724428A0A0B4J2F2 783 aa24.35■■□□□ 1.49
RAB5C-202ENST00000393860 SIK1P57059 783 aa24.35■■□□□ 1.49
RAB5C-202ENST00000393860 PA2G4Q9UQ80 394 aaKnown RBP24.35■■□□□ 1.49
RAB5C-202ENST00000393860 BMP2KLQ5H9B9 411 aa24.35■■□□□ 1.49
RAB5C-202ENST00000393860 IL1RAPL2Q9NP60 686 aa24.35■■□□□ 1.49
RAB5C-202ENST00000393860 GSPT1P15170 499 aaKnown RBP24.34■■□□□ 1.49
RAB5C-202ENST00000393860 ITPK1Q13572 414 aa24.34■■□□□ 1.49
RAB5C-202ENST00000393860 CWC25Q9NXE8 425 aaPredicted RBP24.33■■□□□ 1.49
RAB5C-202ENST00000393860 TRPC5Q9UL62 973 aaPredicted RBP24.33■■□□□ 1.49
RAB5C-202ENST00000393860 TTC22Q5TAA0 569 aa24.32■■□□□ 1.48
RAB5C-202ENST00000393860 TSHZ3Q63HK5 1081 aa24.32■■□□□ 1.48
RAB5C-202ENST00000393860 CASP7P55210 303 aa24.31■■□□□ 1.48
RAB5C-202ENST00000393860 OS9Q13438 667 aaPredicted RBP24.31■■□□□ 1.48
RAB5C-202ENST00000393860 MAP3K15Q6ZN16 1313 aa24.31■■□□□ 1.48
RAB5C-202ENST00000393860 HLFQ16534 295 aa24.31■■□□□ 1.48
RAB5C-202ENST00000393860 RHPN1Q8TCX5 695 aa24.31■■□□□ 1.48
RAB5C-202ENST00000393860 RAB11FIP3O75154 756 aa24.3■■□□□ 1.48
RAB5C-202ENST00000393860 CRKLP46109 303 aaKnown RBP24.3■■□□□ 1.48
RAB5C-202ENST00000393860 KCNQ4P56696 695 aa24.3■■□□□ 1.48
RAB5C-202ENST00000393860 INTS5Q6P9B9 1019 aaKnown RBP24.3■■□□□ 1.48
RAB5C-202ENST00000393860 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
RAB5C-202ENST00000393860 TCIRG1Q13488 830 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 KLHDC4Q8TBB5 520 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 QTRT2Q9H974 415 aaKnown RBP24.29■■□□□ 1.48
RAB5C-202ENST00000393860 CCDC87Q9NVE4 849 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 TBC1D2BQ9UPU7 963 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 BTAF1O14981 1849 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 H7C1W4 665 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 ISCA1Q9BUE6 129 aa24.29■■□□□ 1.48
RAB5C-202ENST00000393860 PDE1AP54750 535 aa24.28■■□□□ 1.48
RAB5C-202ENST00000393860 NUTM1Q86Y26 1132 aa24.28■■□□□ 1.48
RAB5C-202ENST00000393860 CCDC191Q8NCU4 936 aa24.28■■□□□ 1.48
RAB5C-202ENST00000393860 NOP58Q9Y2X3 529 aaKnown RBP24.28■■□□□ 1.48
RAB5C-202ENST00000393860 NHSQ6T4R5 1651 aa24.28■■□□□ 1.48
RAB5C-202ENST00000393860 SALL3Q9BXA9 1300 aa24.28■■□□□ 1.48
RAB5C-202ENST00000393860 IL6STP40189 918 aaPredicted RBP24.27■■□□□ 1.48
RAB5C-202ENST00000393860 KIF1BPQ96EK5 621 aa24.27■■□□□ 1.48
RAB5C-202ENST00000393860 SIL1Q9H173 461 aa24.27■■□□□ 1.48
RAB5C-202ENST00000393860 CICQ96RK0 1608 aaPredicted RBP24.27■■□□□ 1.48
RAB5C-202ENST00000393860 GPTP24298 496 aa24.27■■□□□ 1.48
RAB5C-202ENST00000393860 MFAP1P55081 439 aaKnown RBP24.27■■□□□ 1.48
RAB5C-202ENST00000393860 DZIP3Q86Y13 1208 aaKnown RBP24.27■■□□□ 1.48
RAB5C-202ENST00000393860 MYH14Q7Z406 1995 aaKnown RBP24.27■■□□□ 1.48
RAB5C-202ENST00000393860 MSH5O43196 834 aa24.26■■□□□ 1.47
RAB5C-202ENST00000393860 HSP90AB4PQ58FF6 505 aa24.26■■□□□ 1.47
RAB5C-202ENST00000393860 COL5A3P25940 1745 aaPredicted RBP24.26■■□□□ 1.47
RAB5C-202ENST00000393860 RREB1Q92766 1687 aa24.26■■□□□ 1.47
RAB5C-202ENST00000393860 MX1P20591 662 aa24.25■■□□□ 1.47
RAB5C-202ENST00000393860 GIGYF2Q6Y7W6 1299 aaKnown RBP24.25■■□□□ 1.47
RAB5C-202ENST00000393860 ANKRD36CQ5JPF3 1778 aa24.25■■□□□ 1.47
RAB5C-202ENST00000393860 NUP98P52948 1817 aa24.24■■□□□ 1.47
RAB5C-202ENST00000393860 FOXO4P98177 505 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms