RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 NEMFO60524 1076 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 HMMRO75330 724 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 CPA1P15085 419 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 FBLN1P23142 703 aa20.18■□□□□ 0.82
PTPA-207ENST00000393370 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
PTPA-207ENST00000393370 FILIP1Q7Z7B0 1213 aa20.18■□□□□ 0.82
PTPA-207ENST00000393370 ASXL2Q76L83 1435 aa20.18■□□□□ 0.82
PTPA-207ENST00000393370 RASEFQ8IZ41 740 aa20.18■□□□□ 0.82
PTPA-207ENST00000393370 KIAA0232Q92628 1395 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 ADGRB1O14514 1584 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 VWDEQ8N2E2 1590 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTPA-207ENST00000393370 ICE2Q659A1 982 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
PTPA-207ENST00000393370 MROH2AA6NES4 1674 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 RBM43Q6ZSC3 357 aaKnown RBP20.17■□□□□ 0.82
PTPA-207ENST00000393370 FERMT3Q86UX7 667 aa20.17■□□□□ 0.82
PTPA-207ENST00000393370 KRT85P78386 507 aa20.16■□□□□ 0.82
PTPA-207ENST00000393370 CCDC93Q567U6 631 aa20.16■□□□□ 0.82
PTPA-207ENST00000393370 SEC31AO94979 1220 aaKnown RBP20.16■□□□□ 0.82
PTPA-207ENST00000393370 MMP14P50281 582 aa20.16■□□□□ 0.82
PTPA-207ENST00000393370 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
PTPA-207ENST00000393370 GLI2P10070 1586 aa20.15■□□□□ 0.82
PTPA-207ENST00000393370 SNW1Q13573 536 aaKnown RBP20.15■□□□□ 0.82
PTPA-207ENST00000393370 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
PTPA-207ENST00000393370 MRFAP1L1Q96HT8 127 aa20.15■□□□□ 0.82
PTPA-207ENST00000393370 CLSTN2Q9H4D0 955 aa20.15■□□□□ 0.82
PTPA-207ENST00000393370 SRLQ86TD4 932 aa20.14■□□□□ 0.82
PTPA-207ENST00000393370 UBXN6Q9BZV1 441 aa20.14■□□□□ 0.82
PTPA-207ENST00000393370 KIF1BO60333 1816 aa20.14■□□□□ 0.81
PTPA-207ENST00000393370 KIF2AO00139 706 aaPredicted RBP20.14■□□□□ 0.81
PTPA-207ENST00000393370 NR1I2O75469 434 aa20.14■□□□□ 0.81
PTPA-207ENST00000393370 OAS2P29728 719 aaKnown RBP20.14■□□□□ 0.81
PTPA-207ENST00000393370 PSEN1P49768 467 aa20.14■□□□□ 0.81
PTPA-207ENST00000393370 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.81
PTPA-207ENST00000393370 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTPA-207ENST00000393370 TUBGCP6Q96RT7 1819 aa20.14■□□□□ 0.81
PTPA-207ENST00000393370 ELP1O95163 1332 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 SARM1Q6SZW1 724 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 DDX19AQ9NUU7 478 aaKnown RBP20.13■□□□□ 0.81
PTPA-207ENST00000393370 GOLGA6L19H0YKK7 550 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 GPS2Q13227 327 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 IQCB1Q15051 598 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 HYPKQ9NX55 129 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 FANCAO15360 1455 aa20.13■□□□□ 0.81
PTPA-207ENST00000393370 GOLGA6L4A6NEF3 574 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 CASTP20810 708 aaKnown RBP20.12■□□□□ 0.81
PTPA-207ENST00000393370 ST3GAL1Q11201 340 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 AFAP1Q8N556 730 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 KCND1Q9NSA2 647 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 SLC52A1Q9NWF4 448 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 ORC3Q9UBD5 711 aaPredicted RBP20.12■□□□□ 0.81
PTPA-207ENST00000393370 RRP15Q9Y3B9 282 aaKnown RBP20.12■□□□□ 0.81
PTPA-207ENST00000393370 SASH3O75995 380 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
PTPA-207ENST00000393370 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
PTPA-207ENST00000393370 E4F1Q66K89 784 aaPredicted RBP20.11■□□□□ 0.81
PTPA-207ENST00000393370 TFIP11Q9UBB9 837 aaKnown RBP20.11■□□□□ 0.81
PTPA-207ENST00000393370 TTC21BQ7Z4L5 1316 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 TTC21AQ8NDW8 1320 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 DEPDC5O75140 1603 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 C11orf57Q6ZUT1 292 aaPredicted RBP20.11■□□□□ 0.81
PTPA-207ENST00000393370 REXO1L1PQ8IX06 675 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 CWC15Q9P013 229 aaKnown RBP20.11■□□□□ 0.81
PTPA-207ENST00000393370 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 KIF3BO15066 747 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
PTPA-207ENST00000393370 FBXO18Q8NFZ0 1043 aa20.11■□□□□ 0.81
PTPA-207ENST00000393370 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
PTPA-207ENST00000393370 UBXN4Q92575 508 aa20.1■□□□□ 0.81
PTPA-207ENST00000393370 PPP1R13BQ96KQ4 1090 aa20.1■□□□□ 0.81
PTPA-207ENST00000393370 TOMM22Q9NS69 142 aa20.1■□□□□ 0.81
PTPA-207ENST00000393370 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
PTPA-207ENST00000393370 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
PTPA-207ENST00000393370 LARP1BQ659C4 914 aaKnown RBP20.09■□□□□ 0.81
PTPA-207ENST00000393370 NECAB1Q8N987 351 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 GOLGA5Q8TBA6 731 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 SPATA32Q96LK8 384 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 STAP2Q9UGK3 403 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 TBC1D8O95759 1140 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 SMC1AQ14683 1233 aaKnown RBP20.09■□□□□ 0.81
PTPA-207ENST00000393370 SLC4A10Q6U841 1118 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 CCDC34Q96HJ3 373 aa20.09■□□□□ 0.81
PTPA-207ENST00000393370 GUCY2CP25092 1073 aa20.08■□□□□ 0.81
PTPA-207ENST00000393370 FAM69CQ0P6D2 419 aa20.08■□□□□ 0.81
PTPA-207ENST00000393370 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.81
PTPA-207ENST00000393370 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.81
PTPA-207ENST00000393370 SGSM2O43147 1006 aa20.08■□□□□ 0.8
PTPA-207ENST00000393370 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.8
PTPA-207ENST00000393370 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
PTPA-207ENST00000393370 NCAPGQ9BPX3 1015 aa20.07■□□□□ 0.8
PTPA-207ENST00000393370 EPC1Q9H2F5 836 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms