RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 NEURL1BA8MQ27 555 aa21.81■■□□□ 1.08
MBD4-202ENST00000393278 HDAC5Q9UQL6 1122 aa21.81■■□□□ 1.08
MBD4-202ENST00000393278 GRM8O00222 908 aa21.8■■□□□ 1.08
MBD4-202ENST00000393278 C8orf34Q49A92 452 aa21.8■■□□□ 1.08
MBD4-202ENST00000393278 TJP1Q07157 1748 aa21.8■■□□□ 1.08
MBD4-202ENST00000393278 A0A0G2JS52 829 aa21.79■■□□□ 1.08
MBD4-202ENST00000393278 MYT1Q01538 1121 aa21.79■■□□□ 1.08
MBD4-202ENST00000393278 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
MBD4-202ENST00000393278 NUP188Q5SRE5 1749 aa21.79■■□□□ 1.08
MBD4-202ENST00000393278 CYP19A1P11511 503 aaPredicted RBP21.79■■□□□ 1.08
MBD4-202ENST00000393278 TRPC5Q9UL62 973 aaPredicted RBP21.79■■□□□ 1.08
MBD4-202ENST00000393278 GCKRQ14397 625 aa21.78■■□□□ 1.08
MBD4-202ENST00000393278 SSH3Q8TE77 659 aa21.78■■□□□ 1.08
MBD4-202ENST00000393278 POLA2Q14181 598 aa21.77■■□□□ 1.08
MBD4-202ENST00000393278 MTX1Q13505 466 aa21.76■■□□□ 1.07
MBD4-202ENST00000393278 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
MBD4-202ENST00000393278 KCNQ2O43526 872 aa21.75■■□□□ 1.07
MBD4-202ENST00000393278 ONECUT3O60422 494 aaPredicted RBP21.75■■□□□ 1.07
MBD4-202ENST00000393278 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
MBD4-202ENST00000393278 CICQ96RK0 1608 aaPredicted RBP21.75■■□□□ 1.07
MBD4-202ENST00000393278 SMARCC1Q92922 1105 aaPredicted RBP21.75■■□□□ 1.07
MBD4-202ENST00000393278 PALLDQ8WX93 1383 aa21.75■■□□□ 1.07
MBD4-202ENST00000393278 AFDNP55196 1824 aaKnown RBP21.74■■□□□ 1.07
MBD4-202ENST00000393278 SUCLG2Q96I99 432 aa21.74■■□□□ 1.07
MBD4-202ENST00000393278 EXOC6BQ9Y2D4 811 aa21.74■■□□□ 1.07
MBD4-202ENST00000393278 LOC102724428A0A0B4J2F2 783 aa21.73■■□□□ 1.07
MBD4-202ENST00000393278 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
MBD4-202ENST00000393278 SIK1P57059 783 aa21.73■■□□□ 1.07
MBD4-202ENST00000393278 ZBTB3Q9H5J0 574 aa21.73■■□□□ 1.07
MBD4-202ENST00000393278 ATP5J2-PTCD1G3V325 749 aa21.72■■□□□ 1.07
MBD4-202ENST00000393278 KAZALD1Q96I82 304 aa21.72■■□□□ 1.07
MBD4-202ENST00000393278 ZBTB1Q9Y2K1 713 aa21.72■■□□□ 1.07
MBD4-202ENST00000393278 COL15A1P39059 1388 aa21.71■■□□□ 1.07
MBD4-202ENST00000393278 APBB1O00213 710 aa21.71■■□□□ 1.07
MBD4-202ENST00000393278 KIF6Q6ZMV9 814 aa21.71■■□□□ 1.07
MBD4-202ENST00000393278 ZNF330Q9Y3S2 320 aaPredicted RBP21.71■■□□□ 1.07
MBD4-202ENST00000393278 SMARCA5O60264 1052 aaPredicted RBP21.7■■□□□ 1.06
MBD4-202ENST00000393278 ATP6V1AP38606 617 aa21.7■■□□□ 1.06
MBD4-202ENST00000393278 ZNF831Q5JPB2 1677 aa21.7■■□□□ 1.06
MBD4-202ENST00000393278 IL6STP40189 918 aaPredicted RBP21.69■■□□□ 1.06
MBD4-202ENST00000393278 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 BICC1Q9H694 974 aaKnown RBP21.69■■□□□ 1.06
MBD4-202ENST00000393278 QTRT2Q9H974 415 aaKnown RBP21.69■■□□□ 1.06
MBD4-202ENST00000393278 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 MAP3K15Q6ZN16 1313 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 RREB1Q92766 1687 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 A0A087WZG4 1122 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
MBD4-202ENST00000393278 CWC25Q9NXE8 425 aaPredicted RBP21.69■■□□□ 1.06
MBD4-202ENST00000393278 RAB11FIP3O75154 756 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 CASP7P55210 303 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 TCIRG1Q13488 830 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 ITPK1Q13572 414 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 BMP2KLQ5H9B9 411 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 SEPT12Q8IYM1 358 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
MBD4-202ENST00000393278 CCDC191Q8NCU4 936 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 ISCA1Q9BUE6 129 aa21.68■■□□□ 1.06
MBD4-202ENST00000393278 SURF6O75683 361 aaKnown RBP21.67■■□□□ 1.06
MBD4-202ENST00000393278 INTS5Q6P9B9 1019 aaKnown RBP21.67■■□□□ 1.06
MBD4-202ENST00000393278 UBE3BQ7Z3V4 1068 aa21.67■■□□□ 1.06
MBD4-202ENST00000393278 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
MBD4-202ENST00000393278 NOP58Q9Y2X3 529 aaKnown RBP21.67■■□□□ 1.06
MBD4-202ENST00000393278 H7C1W4 665 aa21.66■■□□□ 1.06
MBD4-202ENST00000393278 CRKLP46109 303 aaKnown RBP21.66■■□□□ 1.06
MBD4-202ENST00000393278 TRIM28Q13263 835 aaKnown RBP21.66■■□□□ 1.06
MBD4-202ENST00000393278 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
MBD4-202ENST00000393278 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
MBD4-202ENST00000393278 GIGYF2Q6Y7W6 1299 aaKnown RBP21.65■■□□□ 1.06
MBD4-202ENST00000393278 PTF1AQ7RTS3 328 aa21.65■■□□□ 1.06
MBD4-202ENST00000393278 OTUD7AQ8TE49 926 aaPredicted RBP21.65■■□□□ 1.06
MBD4-202ENST00000393278 BTAF1O14981 1849 aa21.64■■□□□ 1.06
MBD4-202ENST00000393278 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
MBD4-202ENST00000393278 RABL6Q3YEC7 729 aaPredicted RBP21.64■■□□□ 1.05
MBD4-202ENST00000393278 FAM182BQ5T319 152 aa21.64■■□□□ 1.05
MBD4-202ENST00000393278 JARID2Q92833 1246 aaPredicted RBP21.64■■□□□ 1.05
MBD4-202ENST00000393278 COL5A3P25940 1745 aaPredicted RBP21.64■■□□□ 1.05
MBD4-202ENST00000393278 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
MBD4-202ENST00000393278 ERVV-1B6SEH8 477 aa21.63■■□□□ 1.05
MBD4-202ENST00000393278 HSP90AB3PQ58FF7 597 aa21.63■■□□□ 1.05
MBD4-202ENST00000393278 DZIP3Q86Y13 1208 aaKnown RBP21.63■■□□□ 1.05
MBD4-202ENST00000393278 KIF1BPQ96EK5 621 aa21.63■■□□□ 1.05
MBD4-202ENST00000393278 ARXQ96QS3 562 aa21.63■■□□□ 1.05
MBD4-202ENST00000393278 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
MBD4-202ENST00000393278 SALL3Q9BXA9 1300 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 HLFQ16534 295 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 RHPN1Q8TCX5 695 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 OSBPL3Q9H4L5 887 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
MBD4-202ENST00000393278 GSPT1P15170 499 aaKnown RBP21.61■■□□□ 1.05
MBD4-202ENST00000393278 MYH14Q7Z406 1995 aaKnown RBP21.61■■□□□ 1.05
MBD4-202ENST00000393278 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
MBD4-202ENST00000393278 ANKRD36CQ5JPF3 1778 aa21.6■■□□□ 1.05
MBD4-202ENST00000393278 TBC1D2BQ9UPU7 963 aa21.6■■□□□ 1.05
MBD4-202ENST00000393278 SEC24BO95487 1268 aa21.59■■□□□ 1.05
MBD4-202ENST00000393278 PDE1AP54750 535 aa21.59■■□□□ 1.05
MBD4-202ENST00000393278 FOXO4P98177 505 aa21.59■■□□□ 1.05
MBD4-202ENST00000393278 ERC1Q8IUD2 1116 aa21.59■■□□□ 1.05
MBD4-202ENST00000393278 LINC00116Q8NCU8 138 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms