RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 HYPKQ9NX55 129 aa13.74□□□□□ -0.21
PDGFD-202ENST00000393158 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
PDGFD-202ENST00000393158 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
PDGFD-202ENST00000393158 KCNQ4P56696 695 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
PDGFD-202ENST00000393158 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 MYL6BP14649 208 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 SIK1P57059 783 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 MAP3K2Q9Y2U5 619 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 LRP5O75197 1615 aa13.72□□□□□ -0.21
PDGFD-202ENST00000393158 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
PDGFD-202ENST00000393158 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
PDGFD-202ENST00000393158 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
PDGFD-202ENST00000393158 AAMPQ13685 434 aa13.71□□□□□ -0.21
PDGFD-202ENST00000393158 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
PDGFD-202ENST00000393158 STK31Q9BXU1 1019 aa13.71□□□□□ -0.21
PDGFD-202ENST00000393158 COL15A1P39059 1388 aa13.71□□□□□ -0.21
PDGFD-202ENST00000393158 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.21
PDGFD-202ENST00000393158 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
PDGFD-202ENST00000393158 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
PDGFD-202ENST00000393158 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
PDGFD-202ENST00000393158 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
PDGFD-202ENST00000393158 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
PDGFD-202ENST00000393158 SMIM5Q71RC9 77 aa13.69□□□□□ -0.22
PDGFD-202ENST00000393158 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
PDGFD-202ENST00000393158 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
PDGFD-202ENST00000393158 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
PDGFD-202ENST00000393158 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
PDGFD-202ENST00000393158 CCT4P50991 539 aaKnown RBP13.69□□□□□ -0.22
PDGFD-202ENST00000393158 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
PDGFD-202ENST00000393158 ANKRD31Q8N7Z5 1873 aa13.69□□□□□ -0.22
PDGFD-202ENST00000393158 HLFQ16534 295 aa13.68□□□□□ -0.22
PDGFD-202ENST00000393158 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
PDGFD-202ENST00000393158 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
PDGFD-202ENST00000393158 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
PDGFD-202ENST00000393158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
PDGFD-202ENST00000393158 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
PDGFD-202ENST00000393158 MS4A1P11836 297 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 PLBD2Q8NHP8 589 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 PDE4AP27815 886 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 CNTNAP4Q9C0A0 1308 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 ISCA1Q9BUE6 129 aa13.67□□□□□ -0.22
PDGFD-202ENST00000393158 POLA2Q14181 598 aa13.66□□□□□ -0.22
PDGFD-202ENST00000393158 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
PDGFD-202ENST00000393158 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
PDGFD-202ENST00000393158 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
PDGFD-202ENST00000393158 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
PDGFD-202ENST00000393158 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
PDGFD-202ENST00000393158 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
PDGFD-202ENST00000393158 GCKRQ14397 625 aa13.65□□□□□ -0.22
PDGFD-202ENST00000393158 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
PDGFD-202ENST00000393158 CAMTA2O94983 1202 aa13.65□□□□□ -0.22
PDGFD-202ENST00000393158 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
PDGFD-202ENST00000393158 MTX1Q13505 466 aa13.65□□□□□ -0.22
PDGFD-202ENST00000393158 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
PDGFD-202ENST00000393158 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
PDGFD-202ENST00000393158 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
PDGFD-202ENST00000393158 MAP3K15Q6ZN16 1313 aa13.64□□□□□ -0.23
PDGFD-202ENST00000393158 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
PDGFD-202ENST00000393158 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
PDGFD-202ENST00000393158 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
PDGFD-202ENST00000393158 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
PDGFD-202ENST00000393158 H7C1W4 665 aa13.63□□□□□ -0.23
PDGFD-202ENST00000393158 FOXO4P98177 505 aa13.63□□□□□ -0.23
PDGFD-202ENST00000393158 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
PDGFD-202ENST00000393158 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
PDGFD-202ENST00000393158 CCDC87Q9NVE4 849 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
PDGFD-202ENST00000393158 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
PDGFD-202ENST00000393158 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 COL11A2P13942 1736 aaPredicted RBP13.62□□□□□ -0.23
PDGFD-202ENST00000393158 LTBP1Q14766 1721 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 TRIM37O94972 964 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 RXRBP28702 533 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 MYD88Q99836 296 aa13.62□□□□□ -0.23
PDGFD-202ENST00000393158 NUCB1Q02818 461 aa13.61□□□□□ -0.23
PDGFD-202ENST00000393158 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
PDGFD-202ENST00000393158 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
PDGFD-202ENST00000393158 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
PDGFD-202ENST00000393158 GRM8O00222 908 aa13.61□□□□□ -0.23
PDGFD-202ENST00000393158 STARD3NLO95772 234 aa13.61□□□□□ -0.23
PDGFD-202ENST00000393158 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
PDGFD-202ENST00000393158 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
PDGFD-202ENST00000393158 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms