RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 MYO1BO43795 1136 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
PKP4-201ENST00000389757 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 PARD3Q8TEW0 1356 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
PKP4-201ENST00000389757 GSTO1P78417 241 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 RNF214Q8ND24 703 aa12.07□□□□□ -0.48
PKP4-201ENST00000389757 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
PKP4-201ENST00000389757 TRAK2O60296 914 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 LMBR1LQ6UX01 489 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 ARID3AQ99856 593 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 DACH1Q9UI36 760 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 YEATS2Q9ULM3 1422 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 TNIP1Q15025 636 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 ZFYVE27Q5T4F4 411 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
PKP4-201ENST00000389757 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 FEZ1Q99689 392 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 TRIM5Q9C035 493 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
PKP4-201ENST00000389757 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
PKP4-201ENST00000389757 SMC2O95347 1197 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 CEP131Q9UPN4 1083 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 MEIS3Q99687 375 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 PDE4BQ07343 736 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
PKP4-201ENST00000389757 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 SYCP1Q15431 976 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 COL17A1Q9UMD9 1497 aaPredicted RBP12.05□□□□□ -0.48
PKP4-201ENST00000389757 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
PKP4-201ENST00000389757 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 TSPY26PQ9H489 355 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
PKP4-201ENST00000389757 LTKP29376 864 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
PKP4-201ENST00000389757 CRNKL1Q9BZJ0 848 aaKnown RBP12.04□□□□□ -0.48
PKP4-201ENST00000389757 TNMDQ9H2S6 317 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 GNPATO15228 680 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
PKP4-201ENST00000389757 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 CUL5Q93034 780 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 SMARCE1Q969G3 411 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.04□□□□□ -0.485e-10■■■■■ 31.4
PKP4-201ENST00000389757 TRAPPC3LQ5T215 181 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 PHACTR3Q96KR7 559 aa12.04□□□□□ -0.48
PKP4-201ENST00000389757 SH2B1Q9NRF2 756 aaPredicted RBP12.04□□□□□ -0.48
PKP4-201ENST00000389757 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
PKP4-201ENST00000389757 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
PKP4-201ENST00000389757 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
PKP4-201ENST00000389757 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 GOLGA8AA7E2F4 631 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 GOLGA8BA8MQT2 603 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 CCDC192P0DO97 292 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 ZNF804AQ7Z570 1209 aa12.03□□□□□ -0.48
PKP4-201ENST00000389757 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.48
PKP4-201ENST00000389757 CEP57L1Q8IYX8 460 aa12.02□□□□□ -0.48
PKP4-201ENST00000389757 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.48
PKP4-201ENST00000389757 ZFYP08048 801 aaPredicted RBP12.02□□□□□ -0.49
PKP4-201ENST00000389757 SOS1Q07889 1333 aaPredicted RBP12.02□□□□□ -0.49
PKP4-201ENST00000389757 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
PKP4-201ENST00000389757 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
PKP4-201ENST00000389757 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 USP21Q9UK80 565 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 MRE11P49959 708 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 GPS2Q13227 327 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 MFSD6Q6ZSS7 791 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
PKP4-201ENST00000389757 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
PKP4-201ENST00000389757 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 KIF5BP33176 963 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 TANGO6Q9C0B7 1094 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 SERPINC1P01008 464 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
PKP4-201ENST00000389757 EHMT1Q9H9B1 1298 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 CYP7A1P22680 504 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 ZNHIT6Q9NWK9 470 aaKnown RBP12.01□□□□□ -0.49
PKP4-201ENST00000389757 IQSEC3Q9UPP2 1182 aaPredicted RBP12.01□□□□□ -0.49
PKP4-201ENST00000389757 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
PKP4-201ENST00000389757 SSRP1Q08945 709 aaKnown RBP12□□□□□ -0.49
PKP4-201ENST00000389757 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
PKP4-201ENST00000389757 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
PKP4-201ENST00000389757 KAT14Q9H8E8 782 aa12□□□□□ -0.49
PKP4-201ENST00000389757 DDX21Q9NR30 783 aaKnown RBP eCLIP12□□□□□ -0.49
PKP4-201ENST00000389757 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
PKP4-201ENST00000389757 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms